RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 LDAHQ9H6V9 325 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 FAM30AQ9NZY2 134 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 FEZ2Q9UHY8 353 aaPredicted RBP5.69□□□□□ -1.5
SMC4-218ENST00000486711 AJAP1Q9UKB5 411 aaPredicted RBP5.69□□□□□ -1.5
SMC4-218ENST00000486711 L1RE1Q9UN81 338 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 PCDHA3Q9Y5H8 950 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 COMMD10Q9Y6G5 202 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 ARHGEF17Q96PE2 2063 aaPredicted RBP5.69□□□□□ -1.5
SMC4-218ENST00000486711 CFAP69A5D8W1 941 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 GOLIM4O00461 696 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 PMM2O15305 246 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 TPD52L2O43399 206 aaKnown RBP5.68□□□□□ -1.5
SMC4-218ENST00000486711 PQBP1O60828 265 aaKnown RBP5.68□□□□□ -1.5
SMC4-218ENST00000486711 C1RP00736 705 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 GCSHP23434 173 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 RAB1AP62820 205 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 CXADRP78310 365 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 FGL2Q14314 439 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 CNN3Q15417 329 aaKnown RBP5.68□□□□□ -1.5
SMC4-218ENST00000486711 CYB5RLQ6IPT4 315 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 MAEAQ7L5Y9 396 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 HEATR3Q7Z4Q2 680 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 FAM98AQ8NCA5 519 aaKnown RBP5.68□□□□□ -1.5
SMC4-218ENST00000486711 CASKIN2Q8WXE0 1202 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 SLC35A4Q96G79 324 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 BOD1Q96IK1 185 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 TNIP3Q96KP6 325 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 MRGPRX4Q96LA9 322 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 VRK1Q99986 396 aaPredicted RBP5.68□□□□□ -1.5
SMC4-218ENST00000486711 LRFN3Q9BTN0 628 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 ARMT1Q9H993 441 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 GALNT9Q9HCQ5 603 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 CNNM1Q9NRU3 951 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 TMEM74BQ9NUR3 256 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 TBCCD1Q9NVR7 557 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 PNPOQ9NVS9 261 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 ABCF2Q9UG63 623 aa5.68□□□□□ -1.5
SMC4-218ENST00000486711 A0A088AWK7 358 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 LRRC14BA6NHZ5 514 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 FTH1P19P0C7X4 201 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 FGFR4P22455 802 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 PEX2P28328 305 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 GUCY1A2P33402 732 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 PTH2RP49190 550 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 CREMQ03060 361 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 SEMA5AQ13591 1074 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 LRCH2Q5VUJ6 765 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 OTUD7BQ6GQQ9 843 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 Q6ZNX1 250 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 SH2D3CQ8N5H7 860 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 IFI44Q8TCB0 444 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 MORC4Q8TE76 937 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 LRTOMTQ8WZ04 291 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 SPATA5L1Q9BVQ7 753 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 WDCPQ9H6R7 721 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 ALG13Q9NP73 1137 aaKnown RBP5.67□□□□□ -1.5
SMC4-218ENST00000486711 SARS2Q9NP81 518 aaKnown RBP5.67□□□□□ -1.5
SMC4-218ENST00000486711 CHST12Q9NRB3 414 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 KCNE5Q9UJ90 142 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 PCDHGB6Q9Y5F9 930 aa5.67□□□□□ -1.5
SMC4-218ENST00000486711 A0A1W2PPL8 197 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 GPANK1O95872 356 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 AMY1AP04745 511 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 CDK4P11802 303 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 TYRP14679 529 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 MALP21145 153 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 ALDH1A3P47895 512 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 CTXN1P60606 82 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 NKX6-1P78426 367 aaPredicted RBP5.66□□□□□ -1.5
SMC4-218ENST00000486711 TLE1Q04724 770 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 MTM1Q13496 603 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 ZNF169Q14929 603 aaPredicted RBP5.66□□□□□ -1.5
SMC4-218ENST00000486711 UBXN2BQ14CS0 331 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 FOXR2Q6PJQ5 311 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 BRIX1Q8TDN6 353 aaKnown RBP5.66□□□□□ -1.5
SMC4-218ENST00000486711 STON2Q8WXE9 905 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 DMRTA2Q96SC8 542 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 NUP62CLQ9H1M0 184 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 KIAA1586Q9HCI6 787 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 CASS4Q9NQ75 786 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 GNL3LQ9NVN8 582 aaKnown RBP5.66□□□□□ -1.5
SMC4-218ENST00000486711 LRIT1Q9P2V4 623 aa5.66□□□□□ -1.5
SMC4-218ENST00000486711 PHGDHO43175 533 aaKnown RBP5.65□□□□□ -1.5
SMC4-218ENST00000486711 MYL3P08590 195 aa5.65□□□□□ -1.5
SMC4-218ENST00000486711 AK2P54819 239 aa5.65□□□□□ -1.5
SMC4-218ENST00000486711 ZNF280AP59817 542 aaPredicted RBP5.65□□□□□ -1.5
SMC4-218ENST00000486711 HSD11B2P80365 405 aa5.65□□□□□ -1.5
SMC4-218ENST00000486711 SIM1P81133 766 aaPredicted RBP5.65□□□□□ -1.5
SMC4-218ENST00000486711 IFIT5Q13325 482 aaKnown RBP5.65□□□□□ -1.5
SMC4-218ENST00000486711 SNAPC2Q13487 334 aa5.65□□□□□ -1.5
SMC4-218ENST00000486711 PLS1Q14651 629 aa5.65□□□□□ -1.5
SMC4-218ENST00000486711 POLD3Q15054 466 aaPredicted RBP5.65□□□□□ -1.5
SMC4-218ENST00000486711 GORABQ5T7V8 394 aa5.65□□□□□ -1.5
SMC4-218ENST00000486711 ZNF529Q6P280 563 aa5.65□□□□□ -1.5
SMC4-218ENST00000486711 SEM1Q6ZVN7 128 aa5.65□□□□□ -1.5
SMC4-218ENST00000486711 ZGPATQ8N5A5 531 aaKnown RBP5.65□□□□□ -1.5
SMC4-218ENST00000486711 ELAC2Q9BQ52 826 aaKnown RBP5.65□□□□□ -1.5
SMC4-218ENST00000486711 LRRC27Q9C0I9 530 aa5.65□□□□□ -1.5
SMC4-218ENST00000486711 BHMT2Q9H2M3 363 aa5.65□□□□□ -1.5
SMC4-218ENST00000486711 MYH16Q9H6N6 1097 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms