RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 A0A0A6YYK5 440 aaPredicted RBP9.66□□□□□ -0.86
COL12A1-208ENST00000486533 GTPBP10A4D1E9 387 aaKnown RBP9.66□□□□□ -0.86
COL12A1-208ENST00000486533 PDXKO00764 312 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 ZNF263O14978 683 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 PER2O15055 1255 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 ZBTB39O15060 712 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 N4BP1O75113 896 aaKnown RBP9.66□□□□□ -0.86
COL12A1-208ENST00000486533 ERLIN2O94905 339 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 FERP16591 822 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 ATF7P17544 494 aaPredicted RBP9.66□□□□□ -0.86
COL12A1-208ENST00000486533 MUTP22033 750 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 RFX1P22670 979 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 PPM1AP35813 382 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 PHKA2P46019 1235 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 POLR2FP61218 127 aaKnown RBP9.66□□□□□ -0.86
COL12A1-208ENST00000486533 SKOR1P84550 965 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 ADAM9Q13443 819 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 ADAM15Q13444 863 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 RPS6KA1Q15418 735 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 KLHDC7AQ5VTJ3 777 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 PLPP4Q5VZY2 271 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 HGSNATQ68CP4 663 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 ZNF598Q86UK7 904 aaKnown RBP9.66□□□□□ -0.86
COL12A1-208ENST00000486533 CD302Q8IX05 232 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 EFHBQ8N7U6 833 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 LRRC15Q8TF66 581 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 TCP11Q8WWU5 503 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 PRPF31Q8WWY3 499 aaKnown RBP9.66□□□□□ -0.86
COL12A1-208ENST00000486533 DRC1Q96MC2 740 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 NAP1L3Q99457 506 aaPredicted RBP9.66□□□□□ -0.86
COL12A1-208ENST00000486533 TCF25Q9BQ70 676 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 EIF2AK1Q9BQI3 630 aaKnown RBP9.66□□□□□ -0.86
COL12A1-208ENST00000486533 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.66□□□□□ -0.86
COL12A1-208ENST00000486533 MRPL9Q9BYD2 267 aaKnown RBP9.66□□□□□ -0.86
COL12A1-208ENST00000486533 IFT122Q9HBG6 1241 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 ENTPD7Q9NQZ7 604 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 FEZ2Q9UHY8 353 aaPredicted RBP9.66□□□□□ -0.86
COL12A1-208ENST00000486533 CD207Q9UJ71 328 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 TRAF3IP3Q9Y228 551 aa9.66□□□□□ -0.86
COL12A1-208ENST00000486533 MYH10P35580 1976 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 A0A087WUV0 522 aaPredicted RBP9.65□□□□□ -0.86
COL12A1-208ENST00000486533 HMGB1P1B2RPK0 211 aaPredicted RBP9.65□□□□□ -0.86
COL12A1-208ENST00000486533 PDE2AO00408 941 aaPredicted RBP9.65□□□□□ -0.86
COL12A1-208ENST00000486533 ZNF185O15231 689 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 EIF3DO15371 548 aaKnown RBP eCLIP9.65□□□□□ -0.86
COL12A1-208ENST00000486533 MBTPS2O43462 519 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 GAS2O43903 313 aaKnown RBP9.65□□□□□ -0.86
COL12A1-208ENST00000486533 ZC3H11AO75152 810 aaKnown RBP eCLIP9.65□□□□□ -0.86
COL12A1-208ENST00000486533 KIAA0754O94854 1291 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 SLITRK3O94933 977 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 PLEKP08567 350 aaPredicted RBP9.65□□□□□ -0.86
COL12A1-208ENST00000486533 SKIP12755 728 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 NR2F2P24468 414 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 PRKCIP41743 596 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 ALDH7A1P49419 539 aaKnown RBP9.65□□□□□ -0.86
COL12A1-208ENST00000486533 RAB27AP51159 221 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 GYS2P54840 703 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 ERVFC1P60507 584 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 PLCB3Q01970 1234 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 KRT17Q04695 432 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 ZP2Q05996 745 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 GFPT1Q06210 699 aaPredicted RBP9.65□□□□□ -0.86
COL12A1-208ENST00000486533 LAMTOR4Q0VGL1 99 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 SMAD4Q13485 552 aaKnown RBP9.65□□□□□ -0.86
COL12A1-208ENST00000486533 BMT2Q1RMZ1 405 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 MEI1Q5TIA1 1274 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 PDE12Q6L8Q7 609 aaKnown RBP9.65□□□□□ -0.86
COL12A1-208ENST00000486533 LRIG3Q6UXM1 1119 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 LRRC31Q6UY01 552 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 RNF149Q8NC42 400 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 LPPQ93052 612 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 LRRC1Q9BTT6 524 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 TLR10Q9BXR5 811 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 GDF3Q9NR23 364 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 FAM105AQ9NUU6 356 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 SPG21Q9NZD8 308 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 SEL1LQ9UBV2 794 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 PRKAG3Q9UGI9 489 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 RSPH14Q9UHP6 348 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 BARX2Q9UMQ3 279 aaPredicted RBP9.65□□□□□ -0.86
COL12A1-208ENST00000486533 KIAA1024Q9UPX6 916 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 LZTS1Q9Y250 596 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 INPP5FQ9Y2H2 1132 aa9.65□□□□□ -0.86
COL12A1-208ENST00000486533 EIF3HO15372 352 aaKnown RBP eCLIP9.64□□□□□ -0.87
COL12A1-208ENST00000486533 PALMO75781 387 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 HEXIM1O94992 359 aaKnown RBP9.64□□□□□ -0.87
COL12A1-208ENST00000486533 CYP11B2P19099 503 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 RPA1P27694 616 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 GBP1P32455 592 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 CA8P35219 290 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 CORO7P57737 925 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 RNASELQ05823 741 aaKnown RBP9.64□□□□□ -0.87
COL12A1-208ENST00000486533 KCNMA1Q12791 1236 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 SMAD2Q15796 467 aaKnown RBP9.64□□□□□ -0.87
COL12A1-208ENST00000486533 NFIL3Q16649 462 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 EXOC3L4Q17RC7 722 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 KNOP1Q1ED39 458 aaKnown RBP9.64□□□□□ -0.87
COL12A1-208ENST00000486533 TTC31Q49AM3 519 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-208ENST00000486533 TMEM31Q5JXX7 168 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 GLB1LQ6UWU2 654 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms