RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 CERS4Q9HA82 394 aa15.58■□□□□ 0.09
POLR2J3-204ENST00000486319 PLEKHA5Q9HAU0 1116 aa15.58■□□□□ 0.09
POLR2J3-204ENST00000486319 SNX12Q9UMY4 172 aa15.58■□□□□ 0.09
POLR2J3-204ENST00000486319 C2CD2Q9Y426 696 aa15.58■□□□□ 0.09
POLR2J3-204ENST00000486319 PCDHB4Q9Y5E5 795 aa15.58■□□□□ 0.09
POLR2J3-204ENST00000486319 CHD9Q3L8U1 2897 aa15.58■□□□□ 0.08
POLR2J3-204ENST00000486319 TADA3O75528 432 aa15.58■□□□□ 0.08
POLR2J3-204ENST00000486319 ARHGEF15O94989 841 aa15.58■□□□□ 0.08
POLR2J3-204ENST00000486319 NPTXRO95502 500 aa15.58■□□□□ 0.08
POLR2J3-204ENST00000486319 FTLP02792 175 aaPredicted RBP15.58■□□□□ 0.08
POLR2J3-204ENST00000486319 MMEP08473 750 aa15.58■□□□□ 0.08
POLR2J3-204ENST00000486319 NFICP08651 508 aa15.58■□□□□ 0.08
POLR2J3-204ENST00000486319 YWHAEP62258 255 aaKnown RBP15.58■□□□□ 0.08
POLR2J3-204ENST00000486319 JADE1Q6IE81 842 aa15.58■□□□□ 0.08
POLR2J3-204ENST00000486319 PALB2Q86YC2 1186 aa15.58■□□□□ 0.08
POLR2J3-204ENST00000486319 RHOT2Q8IXI1 618 aa15.58■□□□□ 0.08
POLR2J3-204ENST00000486319 SYCE1Q8N0S2 351 aa15.58■□□□□ 0.08
POLR2J3-204ENST00000486319 LINC01599Q8WXQ3 324 aa15.58■□□□□ 0.08
POLR2J3-204ENST00000486319 GAS2L1Q99501 681 aaPredicted RBP15.58■□□□□ 0.08
POLR2J3-204ENST00000486319 DERAQ9Y315 318 aa15.58■□□□□ 0.08
POLR2J3-204ENST00000486319 HYOU1Q9Y4L1 999 aa15.58■□□□□ 0.08
POLR2J3-204ENST00000486319 CTAGE15A4D2H0 777 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 GRID2IPA4D2P6 1211 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 CTAGE8P0CG41 777 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 ABCB4P21439 1286 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 ATICP31939 592 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 YARSP54577 528 aaKnown RBP15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 GPC5P78333 572 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 TMEM132DQ14C87 1099 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 TCEAL1Q15170 157 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 MEI1Q5TIA1 1274 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 TMEM270Q6UE05 265 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 CTAGE6Q86UF2 777 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 CTAGE4Q8IX94 777 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 TPCN2Q8NHX9 752 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 ARNTL2Q8WYA1 636 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 GOLGA1Q92805 767 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 PCDHB18PQ96TA0 734 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 ADAM2Q99965 735 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 TRIM6Q9C030 488 aaPredicted RBP15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 ACP6Q9NPH0 428 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 TAS2R14Q9NYV8 317 aa15.57■□□□□ 0.08
POLR2J3-204ENST00000486319 LINC01553A4QN01 128 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 MEFVO15553 781 aaPredicted RBP15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 MGEA5O60502 916 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 KRT19P08727 400 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 HADHBP55084 474 aaKnown RBP15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 PPP1R2P3Q6NXS1 205 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 TRIM72Q6ZMU5 477 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 SLC24A5Q71RS6 500 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 DNAAF5Q86Y56 855 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 UBR7Q8N806 425 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 C1orf127Q8N9H9 656 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 RBBP8NLQ8NC74 664 aaPredicted RBP15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 LRRN4CLQ8ND94 238 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 SLC35G2Q8TBE7 412 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 TSC1Q92574 1164 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 RPGRIP1Q96KN7 1286 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 TLR10Q9BXR5 811 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 THAP2Q9H0W7 228 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 XYLT2Q9H1B5 865 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 RGS18Q9NS28 235 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 ITGA11Q9UKX5 1188 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 CHD7Q9P2D1 2997 aa15.56■□□□□ 0.08
POLR2J3-204ENST00000486319 ITGB3P05106 788 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 ZSCAN20P17040 1043 aaPredicted RBP15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 IBSPP21815 317 aaPredicted RBP15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 IGFBP4P22692 258 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 GNA15P30679 374 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 CLEC16AQ2KHT3 1053 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 ERCC6LQ2NKX8 1250 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 ZNF667Q5HYK9 610 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 ACAD10Q6JQN1 1059 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 RSRC2Q7L4I2 434 aaKnown RBP15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 SLFN11Q7Z7L1 901 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 NPAS4Q8IUM7 802 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 LRRC57Q8N9N7 239 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 SP7Q8TDD2 431 aaPredicted RBP15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 TGS1Q96RS0 853 aaKnown RBP15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 TSPAN18Q96SJ8 248 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 OSBPL9Q96SU4 736 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 PDCL3Q9H2J4 239 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 VRTNQ9H8Y1 702 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 RNF216Q9NWF9 866 aaPredicted RBP15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 PUF60Q9UHX1 559 aaKnown RBP15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 SIX4Q9UIU6 781 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 MTUS1Q9ULD2 1270 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 LRFN2Q9ULH4 789 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 PIN4Q9Y237 131 aaKnown RBP15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 PCDHB7Q9Y5E2 793 aa15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 V9GYY5 206 aaPredicted RBP15.55■□□□□ 0.08
POLR2J3-204ENST00000486319 RFXAPO00287 272 aa15.54■□□□□ 0.08
POLR2J3-204ENST00000486319 SRGAP2O75044 1071 aa15.54■□□□□ 0.08
POLR2J3-204ENST00000486319 DGKIO75912 1065 aa15.54■□□□□ 0.08
POLR2J3-204ENST00000486319 STAU1O95793 577 aaKnown RBP15.54■□□□□ 0.08
POLR2J3-204ENST00000486319 P4HA1P13674 534 aa15.54■□□□□ 0.08
POLR2J3-204ENST00000486319 ZNF132P52740 706 aa15.54■□□□□ 0.08
POLR2J3-204ENST00000486319 NAA30Q147X3 362 aaPredicted RBP15.54■□□□□ 0.08
POLR2J3-204ENST00000486319 ELF2Q15723 593 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms