RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 KIF4AO95239 1232 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 LCA5LO95447 670 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 FGBP02675 491 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 AMHP03971 560 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 ITGB1P05556 798 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 FAM163BP0C2L3 166 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 CHRNB2P17787 502 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 ETF1P62495 437 aaKnown RBP12.09□□□□□ -0.47
SND1-212ENST00000485871 TNNC1P63316 161 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 ARID5AQ03989 594 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 KLHL30Q0D2K2 578 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 TIGD5Q53EQ6 642 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 DPH6Q7L8W6 267 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 ZNF571Q7Z3V5 609 aaPredicted RBP12.09□□□□□ -0.47
SND1-212ENST00000485871 NOP9Q86U38 636 aaKnown RBP12.09□□□□□ -0.47
SND1-212ENST00000485871 SLC47A2Q86VL8 602 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 FMNL3Q8IVF7 1028 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 RBBP8NLQ8NC74 664 aaPredicted RBP12.09□□□□□ -0.47
SND1-212ENST00000485871 MYLIPQ8WY64 445 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 RABGGTAQ92696 567 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 TWNKQ96RR1 684 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 ZSWIM1Q9BR11 485 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 MRPL45Q9BRJ2 306 aaKnown RBP12.09□□□□□ -0.47
SND1-212ENST00000485871 MRPL9Q9BYD2 267 aaKnown RBP12.09□□□□□ -0.47
SND1-212ENST00000485871 HAUS4Q9H6D7 363 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 CWH43Q9H720 699 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 NHEJ1Q9H9Q4 299 aaPredicted RBP12.09□□□□□ -0.47
SND1-212ENST00000485871 MARCH5Q9NX47 278 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 TRMT1Q9NXH9 659 aaKnown RBP12.09□□□□□ -0.47
SND1-212ENST00000485871 HMGXB4Q9UGU5 601 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 L1RE1Q9UN81 338 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 PPP2R2CQ9Y2T4 447 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 REXO2Q9Y3B8 237 aaKnown RBP12.09□□□□□ -0.47
SND1-212ENST00000485871 SNX9Q9Y5X1 595 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 USP27XA6NNY8 438 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 TBKBP1A7MCY6 615 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 M0QZQ0 153 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 TNFRSF10AO00220 468 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 DDX3XO00571 662 aaKnown RBP eCLIP12.08□□□□□ -0.48
SND1-212ENST00000485871 RIOK3O14730 519 aaKnown RBP12.08□□□□□ -0.48
SND1-212ENST00000485871 CTIFO43310 598 aaKnown RBP12.08□□□□□ -0.48
SND1-212ENST00000485871 EFEMP2O95967 443 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 CALCAP01258 141 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 P4HA1P13674 534 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 FOSL2P15408 326 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 CYP11B1P15538 503 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 CD58P19256 250 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 PAX3P23760 479 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 EIF4A3P38919 411 aaKnown RBP12.08□□□□□ -0.48
SND1-212ENST00000485871 BRCC3P46736 316 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 SLC11A1P49279 550 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 RAD23BP54727 409 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 YWHAEP62258 255 aaKnown RBP12.08□□□□□ -0.48
SND1-212ENST00000485871 HTRA4P83105 476 aaPredicted RBP12.08□□□□□ -0.48
SND1-212ENST00000485871 RASIP1Q5U651 963 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 PSRC1Q6PGN9 363 aaPredicted RBP12.08□□□□□ -0.48
SND1-212ENST00000485871 DCLRE1AQ6PJP8 1040 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 TMEM270Q6UE05 265 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 OTOP2Q7RTS6 562 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 TMCO2Q7Z6W1 182 aaPredicted RBP12.08□□□□□ -0.48
SND1-212ENST00000485871 OSTM1Q86WC4 334 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 CCDC170Q8IYT3 715 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 ABI1Q8IZP0 508 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 LRRC43Q8N309 656 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 TOP6BLQ8N6T0 577 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 SLC30A5Q8TAD4 765 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 LNX1Q8TBB1 728 aaPredicted RBP12.08□□□□□ -0.48
SND1-212ENST00000485871 SLC20A1Q8WUM9 679 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 HERVK_113Q902F9 699 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 SENP8Q96LD8 212 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 TMEM175Q9BSA9 504 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 ELOVL4Q9GZR5 314 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 ZNHIT6Q9NWK9 470 aaKnown RBP12.08□□□□□ -0.48
SND1-212ENST00000485871 CXXC1Q9P0U4 656 aaPredicted RBP12.08□□□□□ -0.48
SND1-212ENST00000485871 BARX2Q9UMQ3 279 aaPredicted RBP12.08□□□□□ -0.48
SND1-212ENST00000485871 PCDHB4Q9Y5E5 795 aa12.08□□□□□ -0.48
SND1-212ENST00000485871 BZW2Q9Y6E2 419 aaKnown RBP12.08□□□□□ -0.48
SND1-212ENST00000485871 A0A087X0T9 212 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 EIF3CLB5ME19 914 aaKnown RBP12.07□□□□□ -0.48
SND1-212ENST00000485871 GABRDO14764 452 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 NRP1O14786 923 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 B3GAT3O94766 335 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 UPP2O95045 317 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 NDUFA10O95299 355 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 CYP11A1P05108 521 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 GALTP07902 379 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 LINC00271P0C7V0 271 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 CCDC172P0C7W6 258 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 FAM228BP0C875 321 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 KRT5P13647 590 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 WARSP23381 471 aaKnown RBP12.07□□□□□ -0.48
SND1-212ENST00000485871 ANXA13P27216 316 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 USP8P40818 1118 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 KIF11P52732 1056 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 NDST1P52848 882 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 FMO1Q01740 532 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 TUBB2AQ13885 445 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 TDRD12Q587J7 1177 aaKnown RBP12.07□□□□□ -0.48
SND1-212ENST00000485871 TOGARAM2Q6ZUX3 1019 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 PALB2Q86YC2 1186 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms