RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 TRHDEQ9UKU6 1024 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 DUSP12Q9UNI6 340 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 ANGPTL3Q9Y5C1 460 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 PXDNQ92626 1479 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 NPHP3Q7Z494 1330 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 PLOD2O00469 737 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 NDC80O14777 642 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 SLC27A2O14975 620 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 KCNQ3O43525 872 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 NEMFO60524 1076 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 TADA3O75528 432 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 RFPL3O75679 317 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 SNUPNO95149 360 aaKnown RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 ADCY5O95622 1261 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 EYA4O95677 639 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 IL33O95760 270 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 CPP00450 1065 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 GCP02774 474 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 NTRK1P04629 796 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 APOA4P06727 396 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 PYGLP06737 847 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 THBDP07204 575 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 ATP5JP18859 108 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 EIF2S2P20042 333 aaKnown RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 XPAP23025 273 aaPredicted RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 ELF1P32519 619 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 CYP2C19P33261 490 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 CNR2P34972 360 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 CHKAP35790 457 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 STAT1P42224 750 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 RFX5P48382 616 aaPredicted RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 KRT85P78386 507 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 CYP4F3Q08477 520 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 STRN3Q13033 797 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 PPFIA1Q13136 1202 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 GRB10Q13322 594 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 NOLC1Q14978 699 aaKnown RBP eCLIP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 SF1Q15637 639 aaKnown RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 CLUL1Q15846 466 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 ADCK5Q3MIX3 580 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 C1orf141Q5JVX7 400 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 ATL3Q6DD88 541 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 GTF2IRD2BQ6EKJ0 949 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 CNNM4Q6P4Q7 775 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 CNSTQ6PJW8 725 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 CWC27Q6UX04 472 aaKnown RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 KDELC2Q7Z4H8 507 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 GTF2IRD2Q86UP8 949 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 SPATS2Q86XZ4 545 aaKnown RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 GALNT13Q8IUC8 556 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 CARFQ8N187 725 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 LILRB1Q8NHL6 650 aaPredicted RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 BTN2A2Q8WVV5 523 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 DPF3Q92784 378 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 DDX11Q96FC9 970 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 CFAP36Q96G28 342 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 JAKMIP1Q96N16 626 aaKnown RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 RMDN3Q96TC7 470 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 MPHOSPH8Q99549 860 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 BAG1Q99933 345 aaPredicted RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 LLPHQ9BRT6 129 aaKnown RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 KATNAL1Q9BW62 490 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 AGXT2Q9BYV1 514 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 MYLK2Q9H1R3 596 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 ZSCAN16Q9H4T2 348 aaPredicted RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 FANCFQ9NPI8 374 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 GPR108Q9NPR9 543 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 PAPOLBQ9NRJ5 636 aaKnown RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 DDX19AQ9NUU7 478 aaKnown RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 GIMAP2Q9UG22 337 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 SAP30BPQ9UHR5 308 aaKnown RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 CNPY2Q9Y2B0 182 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 ANKRD6Q9Y2G4 727 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 LRCH1Q9Y2L9 728 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 MAP3K2Q9Y2U5 619 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 MTF2Q9Y483 593 aaPredicted RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 RBM8AQ9Y5S9 174 aaKnown RBP4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 SQORQ9Y6N5 450 aa4.39□□□□□ -1.71
PRPF38B-205ENST00000485810 KIF1AQ12756 1690 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 TRPM3Q9HCF6 1732 aaPredicted RBP4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 UQCRHLA0A096LP55 91 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 A0A0B4J203 849 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 CCDC196A0A1B0GTZ2 297 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 TRIM75PA6NK02 468 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 RASA4BC9J798 803 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 ARNTLO00327 626 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 NOP56O00567 594 aaKnown RBP4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 NCAM2O15394 837 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 BRINP1O60477 761 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 TMEM127O75204 238 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 TBCAO75347 108 aaKnown RBP4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 TAF5LO75529 589 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 DDAH1O94760 285 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 LARGE1O95461 756 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 SLC4A1P02730 911 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 IGKV5-2P06315 115 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 UQCRHP07919 91 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 MMEP08473 750 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 THEGLP0DJG4 465 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms