RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 STXBP4Q6ZWJ1 553 aa14.86□□□□□ -0.03
SCAF4-206ENST00000485790 ARID3BQ8IVW6 561 aaPredicted RBP14.86□□□□□ -0.03
SCAF4-206ENST00000485790 FIZ1Q96SL8 496 aa14.86□□□□□ -0.03
SCAF4-206ENST00000485790 SEPT5Q99719 369 aaPredicted RBP14.86□□□□□ -0.03
SCAF4-206ENST00000485790 PYM1Q9BRP8 204 aaKnown RBP14.86□□□□□ -0.03
SCAF4-206ENST00000485790 PANK2Q9BZ23 570 aa14.86□□□□□ -0.03
SCAF4-206ENST00000485790 ZCWPW1Q9H0M4 648 aa14.86□□□□□ -0.03
SCAF4-206ENST00000485790 ZSCAN16Q9H4T2 348 aaPredicted RBP14.86□□□□□ -0.03
SCAF4-206ENST00000485790 NCDNQ9UBB6 729 aa14.86□□□□□ -0.03
SCAF4-206ENST00000485790 PPEF2O14830 753 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 GCNT3O95395 438 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 SYT1P21579 422 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 SDHBP21912 280 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 GABRR2P28476 465 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 CDC25CP30307 473 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 STAT6P42226 847 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 TSPY1Q01534 308 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 MTAPQ13126 283 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 LRRC32Q14392 662 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 ARHGAP29Q52LW3 1261 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 GPR158Q5T848 1215 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 USP49Q70CQ1 688 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 SFR1Q86XK3 245 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 KIAA2013Q8IYS2 634 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 SPPL2BQ8TCT7 592 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 LRRC15Q8TF66 581 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 INTS4Q96HW7 963 aaKnown RBP14.85□□□□□ -0.03
SCAF4-206ENST00000485790 ZNF560Q96MR9 790 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 FAM213AQ9BRX8 229 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 LRRC3Q9BY71 257 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 TASP1Q9H6P5 420 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 TMEM206Q9H813 350 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 OBP2AQ9NY56 170 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 FBXO2Q9UK22 296 aaPredicted RBP14.85□□□□□ -0.03
SCAF4-206ENST00000485790 C2orf16Q68DN1 1984 aa14.85□□□□□ -0.03
SCAF4-206ENST00000485790 MTCL1Q9Y4B5 1905 aaKnown RBP14.84□□□□□ -0.03
SCAF4-206ENST00000485790 HUS1O60921 280 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 CCNE1P24864 410 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 WEE1P30291 646 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 CXCL12P48061 93 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 CCR3P51677 355 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 TFAMQ00059 246 aaKnown RBP14.84□□□□□ -0.03
SCAF4-206ENST00000485790 PLCB2Q00722 1185 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 FCHO2Q0JRZ9 810 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 FZD5Q13467 585 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 SLC39A14Q15043 492 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 NFE2Q16621 373 aaPredicted RBP14.84□□□□□ -0.03
SCAF4-206ENST00000485790 L1TD1Q5T7N2 865 aaKnown RBP14.84□□□□□ -0.03
SCAF4-206ENST00000485790 WSCD1Q658N2 575 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 CCDC65Q8IXS2 484 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 ZBTB44Q8NCP5 570 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 CLIC6Q96NY7 704 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 DNAJC25Q9H1X3 360 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 CHRDQ9H2X0 955 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 CRISPLD1Q9H336 500 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 OLFML3Q9NRN5 406 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 PANK4Q9NVE7 773 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 TBC1D7Q9P0N9 293 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 RAB23Q9ULC3 237 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 PCDHB5Q9Y5E4 795 aa14.84□□□□□ -0.03
SCAF4-206ENST00000485790 MYMKA6NI61 221 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 SOBPA7XYQ1 873 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 VNN2O95498 520 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 GARTP22102 1010 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 ADSSP30520 456 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 RBP5P82980 135 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 AMPD3Q01432 767 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 AMPD2Q01433 879 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 DGKKQ5KSL6 1271 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 CRELD2Q6UXH1 353 aaPredicted RBP14.83□□□□□ -0.04
SCAF4-206ENST00000485790 GAREM2Q75VX8 874 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 RALGPS2Q86X27 583 aaPredicted RBP14.83□□□□□ -0.04
SCAF4-206ENST00000485790 TMC8Q8IU68 726 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 GPIHBP1Q8IV16 184 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 TMEM130Q8N3G9 435 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 CSGALNACT2Q8N6G5 542 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 SUMF1Q8NBK3 374 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 OR10T2Q8NGX3 314 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 TMEM209Q96SK2 561 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 STRA6Q9BX79 667 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 AGAP1Q9UPQ3 857 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 VPS13AQ96RL7 3174 aa14.83□□□□□ -0.04
SCAF4-206ENST00000485790 TISP43B9A030 160 aa14.82□□□□□ -0.04
SCAF4-206ENST00000485790 KIAA0391O15091 583 aaKnown RBP14.82□□□□□ -0.04
SCAF4-206ENST00000485790 EXTL3O43909 919 aa14.82□□□□□ -0.04
SCAF4-206ENST00000485790 SOAT2O75908 522 aa14.82□□□□□ -0.04
SCAF4-206ENST00000485790 HAPLN1P10915 354 aaPredicted RBP14.82□□□□□ -0.04
SCAF4-206ENST00000485790 PDIA4P13667 645 aaKnown RBP14.82□□□□□ -0.04
SCAF4-206ENST00000485790 AVPR1AP37288 418 aa14.82□□□□□ -0.04
SCAF4-206ENST00000485790 RPL10AP62906 217 aaKnown RBP14.82□□□□□ -0.04
SCAF4-206ENST00000485790 MYL7Q01449 175 aa14.82□□□□□ -0.04
SCAF4-206ENST00000485790 RESTQ13127 1097 aa14.82□□□□□ -0.04
SCAF4-206ENST00000485790 PUM1Q14671 1186 aaKnown RBP eCLIP14.82□□□□□ -0.04
SCAF4-206ENST00000485790 SURF1Q15526 300 aa14.82□□□□□ -0.04
SCAF4-206ENST00000485790 TSSK4Q6SA08 328 aa14.82□□□□□ -0.04
SCAF4-206ENST00000485790 TMEM86AQ8N2M4 240 aa14.82□□□□□ -0.04
SCAF4-206ENST00000485790 SPEM1Q8N4L4 309 aa14.82□□□□□ -0.04
SCAF4-206ENST00000485790 CELF5Q8N6W0 485 aaKnown RBP14.82□□□□□ -0.04
SCAF4-206ENST00000485790 BPIFB1Q8TDL5 484 aa14.82□□□□□ -0.04
SCAF4-206ENST00000485790 GIPC2Q8TF65 315 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms