RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 PP2D1A8MPX8 630 aa13.3□□□□□ -0.28
SSR4-210ENST00000485612 TRDMT1O14717 391 aaKnown RBP13.3□□□□□ -0.28
SSR4-210ENST00000485612 SYN3O14994 580 aa13.3□□□□□ -0.28
SSR4-210ENST00000485612 EGFP01133 1207 aa13.3□□□□□ -0.28
SSR4-210ENST00000485612 PPP2R5AQ15172 486 aa13.3□□□□□ -0.28
SSR4-210ENST00000485612 DCAF4L1Q3SXM0 396 aa13.3□□□□□ -0.28
SSR4-210ENST00000485612 TAS1R3Q7RTX0 852 aa13.3□□□□□ -0.28
SSR4-210ENST00000485612 DAW1Q8N136 415 aa13.3□□□□□ -0.28
SSR4-210ENST00000485612 TMEM130Q8N3G9 435 aa13.3□□□□□ -0.28
SSR4-210ENST00000485612 BPIFB1Q8TDL5 484 aa13.3□□□□□ -0.28
SSR4-210ENST00000485612 PIGKQ92643 395 aa13.3□□□□□ -0.28
SSR4-210ENST00000485612 LRIG1Q96JA1 1093 aa13.3□□□□□ -0.28
SSR4-210ENST00000485612 LRRC3Q9BY71 257 aa13.3□□□□□ -0.28
SSR4-210ENST00000485612 CDT1Q9H211 546 aa13.3□□□□□ -0.28
SSR4-210ENST00000485612 FOXP1Q9H334 677 aaPredicted RBP13.3□□□□□ -0.28
SSR4-210ENST00000485612 DDX19AQ9NUU7 478 aaKnown RBP13.3□□□□□ -0.28
SSR4-210ENST00000485612 THG1LQ9NWX6 298 aaKnown RBP13.3□□□□□ -0.28
SSR4-210ENST00000485612 KIAA1024Q9UPX6 916 aa13.3□□□□□ -0.28
SSR4-210ENST00000485612 EML5Q05BV3 1969 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 E9PMD0 336 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 NEFLP07196 543 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 MAPK8P45983 427 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 DHPSP49366 369 aaPredicted RBP13.29□□□□□ -0.28
SSR4-210ENST00000485612 TOB1P50616 345 aaPredicted RBP13.29□□□□□ -0.28
SSR4-210ENST00000485612 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.28
SSR4-210ENST00000485612 DGKEP52429 567 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 OSTNP61366 133 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 C19orf57Q0VDD7 668 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 USP39Q53GS9 565 aaKnown RBP13.29□□□□□ -0.28
SSR4-210ENST00000485612 RNF19BQ6ZMZ0 732 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 SYT13Q7L8C5 426 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 PIP4P1Q86T03 277 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 TMC8Q8IU68 726 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 FBXO18Q8NFZ0 1043 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 IFT74Q96LB3 600 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 NUSAP1Q9BXS6 441 aaKnown RBP13.29□□□□□ -0.28
SSR4-210ENST00000485612 ATXN3LQ9H3M9 355 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 CCDC86Q9H6F5 360 aaKnown RBP13.29□□□□□ -0.28
SSR4-210ENST00000485612 CACNA2D2Q9NY47 1150 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 LRWD1Q9UFC0 647 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 EVLQ9UI08 416 aaPredicted RBP13.29□□□□□ -0.28
SSR4-210ENST00000485612 LIMCH1Q9UPQ0 1083 aa13.29□□□□□ -0.28
SSR4-210ENST00000485612 SMIM28A0A1B0GU29 152 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 PODXLO00592 558 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 CPB1P15086 417 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 CDC25AP30304 524 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 EFNA5P52803 228 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 PEX3P56589 373 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 SEMA3BQ13214 749 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 PLD1Q13393 1074 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 ORC2Q13416 577 aaPredicted RBP13.28□□□□□ -0.28
SSR4-210ENST00000485612 RUNX3Q13761 415 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 DMC1Q14565 340 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 IL17AQ16552 155 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 ZNF423Q2M1K9 1284 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 ZNF568Q3ZCX4 644 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 TRIM61Q5EBN2 209 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 GPR158Q5T848 1215 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 HAUS3Q68CZ6 603 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 ZNF280DQ6N043 979 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 KCNK18Q7Z418 384 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 RAB44Q7Z6P3 723 aaPredicted RBP13.28□□□□□ -0.28
SSR4-210ENST00000485612 RPLP0P6Q8NHW5 317 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 SNX29Q8TEQ0 813 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 KIFAP3Q92845 792 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 ZMAT2Q96NC0 199 aaKnown RBP13.28□□□□□ -0.28
SSR4-210ENST00000485612 ACO2Q99798 780 aaKnown RBP13.28□□□□□ -0.28
SSR4-210ENST00000485612 RUSC1Q9BVN2 902 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 GKN1Q9NS71 199 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 PPP4R2Q9NY27 417 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 TNFSF13BQ9Y275 285 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 YIPF1Q9Y548 306 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 PCDHB6Q9Y5E3 794 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 PHLPP2Q6ZVD8 1323 aa13.28□□□□□ -0.28
SSR4-210ENST00000485612 CCDC169A6NNP5 214 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 CYSRT1A8MQ03 144 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 UPK3BL1B0FP48 263 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 UPK3BL2E5RIL1 263 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 K7ERI5 159 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 ABLIM1O14639 778 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 HIP1RO75146 1068 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 DRD1P21728 446 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 MUTP22033 750 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 GRM5P41594 1212 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 NPTX2P47972 431 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 MCM2P49736 904 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 GALK1P51570 392 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 EPHB3P54753 998 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 AMPD2Q01433 879 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 MAPK7Q13164 816 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 FBXO43Q4G163 708 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 ARHGAP15Q53QZ3 475 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 ALKAL1Q6UXT8 129 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 IGSF22Q8N9C0 903 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 CHFRQ96EP1 664 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 ZBTB45Q96K62 511 aaPredicted RBP13.27□□□□□ -0.29
SSR4-210ENST00000485612 TARS2Q9BW92 718 aaKnown RBP13.27□□□□□ -0.29
SSR4-210ENST00000485612 DNAJC25Q9H1X3 360 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 FBRSL1Q9HCM7 1045 aaKnown RBP13.27□□□□□ -0.29
SSR4-210ENST00000485612 PTPRHQ9HD43 1115 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms