RNA–Protein interactions for RNA: ENST00000485412.1

SQSTM1-208, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 656 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-208ENST00000485412 NFICP08651 508 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 GJB2P29033 226 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 PPP2R3AQ06190 1150 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 RILPL1Q5EBL4 403 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 JADE1Q6IE81 842 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 Q6ZS52 159 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 GAREM2Q75VX8 874 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 GPBP1Q86WP2 473 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 C12orf50Q8NA57 414 aaPredicted RBP15.03■□□□□ -0
SQSTM1-208ENST00000485412 OR10T2Q8NGX3 314 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 TTC8Q8TAM2 541 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 FAM212AQ96EL1 285 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 TMX3Q96JJ7 454 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 ZFYVE19Q96K21 471 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 FIZ1Q96SL8 496 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 PLEKHA5Q9HAU0 1116 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 TBX20Q9UMR3 447 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 UBQLN1Q9UMX0 589 aaKnown RBP15.03■□□□□ -0
SQSTM1-208ENST00000485412 EML5Q05BV3 1969 aa15.02■□□□□ -0
SQSTM1-208ENST00000485412 ANKRD63C9JTQ0 380 aa15.02■□□□□ -0
SQSTM1-208ENST00000485412 SPECC1L-ADORA2AF8WAN1 911 aa15.02■□□□□ -0
SQSTM1-208ENST00000485412 K7ENM7 598 aa15.02■□□□□ -0
SQSTM1-208ENST00000485412 HNRNPDLO14979 420 aaKnown RBP15.02■□□□□ -0
SQSTM1-208ENST00000485412 CTHP32929 405 aa15.02■□□□□ -0
SQSTM1-208ENST00000485412 LIG4P49917 911 aa15.02■□□□□ -0
SQSTM1-208ENST00000485412 EPHB3P54753 998 aa15.02■□□□□ -0
SQSTM1-208ENST00000485412 MCM6Q14566 821 aa15.02■□□□□ -0
SQSTM1-208ENST00000485412 OVOS1Q6IE37 1185 aa15.02■□□□□ -0
SQSTM1-208ENST00000485412 CENPPQ6IPU0 288 aa15.02■□□□□ -0
SQSTM1-208ENST00000485412 TXNDC11Q6PKC3 985 aa15.02■□□□□ -0
SQSTM1-208ENST00000485412 DSTYKQ6XUX3 929 aa15.02■□□□□ -0
SQSTM1-208ENST00000485412 RALGPS2Q86X27 583 aaPredicted RBP15.02■□□□□ -0
SQSTM1-208ENST00000485412 CDK5RAP3Q96JB5 506 aa15.02■□□□□ -0
SQSTM1-208ENST00000485412 SENP8Q96LD8 212 aa15.02■□□□□ -0
SQSTM1-208ENST00000485412 LPIN3Q9BQK8 851 aa15.02■□□□□ -0
SQSTM1-208ENST00000485412 ZFHX4Q86UP3 3567 aa15.02□□□□□ -0.01
SQSTM1-208ENST00000485412 A0A0B4J269 797 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 MYBPHLA2RUH7 354 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 AXIN1O15169 862 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 OGTO15294 1046 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 EIF5BO60841 1220 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 PRAMEF12O95522 483 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 PIGRP01833 764 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 ADRB2P07550 413 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 PLCG1P19174 1290 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 CYP3A5P20815 502 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 NMT1P30419 496 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 ZNF131P52739 623 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 LILRA4P59901 499 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 FCHO2Q0JRZ9 810 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 GPR17Q13304 367 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 KARSQ15046 597 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 PON2Q15165 354 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 ARHGAP29Q52LW3 1261 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 ZC2HC1CQ53FD0 456 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 SPATA1Q5VX52 437 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 C9orf57Q5W0N0 161 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 SCARA3Q6AZY7 606 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 WDR5BQ86VZ2 330 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 ARID3BQ8IVW6 561 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 MYCT1Q8N699 235 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 ARRDC1-AS1Q9H2J1 176 aa15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 RPF1Q9H9Y2 349 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 LARSQ9P2J5 1176 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 CPSF3Q9UKF6 684 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-208ENST00000485412 MYO16Q9Y6X6 1858 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 OR6C75A6NL08 312 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 FAM13AO94988 1023 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 ATF6P18850 670 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 TYMPP19971 482 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 ALDH1A3P47895 512 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 ACOT2P49753 483 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 LIMK1P53667 647 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 WNT7BP56706 349 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 CYP4F8P98187 520 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 TNK2Q07912 1038 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 SF3A2Q15428 464 aaKnown RBP15□□□□□ -0.01
SQSTM1-208ENST00000485412 N4BP2L1Q5TBK1 243 aaPredicted RBP15□□□□□ -0.01
SQSTM1-208ENST00000485412 ERICH6BQ5W0A0 696 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 DNAJB7Q7Z6W7 309 aaPredicted RBP15□□□□□ -0.01
SQSTM1-208ENST00000485412 USP37Q86T82 979 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 STKLD1Q8NE28 680 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 KCNN1Q92952 543 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 FAM84AQ96KN4 292 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 MSTO1Q9BUK6 570 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 OXCT2Q9BYC2 517 aaPredicted RBP15□□□□□ -0.01
SQSTM1-208ENST00000485412 SMG9Q9H0W8 520 aaKnown RBP15□□□□□ -0.01
SQSTM1-208ENST00000485412 ZHX3Q9H4I2 956 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 GTSE1Q9NYZ3 720 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 KCND2Q9NZV8 630 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 ODF2LQ9ULJ1 636 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 CACNA1GO43497 2377 aa15□□□□□ -0.01
SQSTM1-208ENST00000485412 ANO9A1A5B4 782 aa14.99□□□□□ -0.01
SQSTM1-208ENST00000485412 PIRO00625 290 aa14.99□□□□□ -0.01
SQSTM1-208ENST00000485412 GABRR2P28476 465 aa14.99□□□□□ -0.01
SQSTM1-208ENST00000485412 PMLP29590 882 aa14.99□□□□□ -0.01
SQSTM1-208ENST00000485412 HOXA6P31267 233 aa14.99□□□□□ -0.01
SQSTM1-208ENST00000485412 RABEP1Q15276 862 aa14.99□□□□□ -0.01
SQSTM1-208ENST00000485412 CCDC6Q16204 474 aa14.99□□□□□ -0.01
SQSTM1-208ENST00000485412 ARHGAP15Q53QZ3 475 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms