RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ZCWPW1Q9H0M4 648 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 AVENQ9NQS1 362 aaPredicted RBP13.9□□□□□ -0.18
HDAC1-209ENST00000484305 CGNQ9P2M7 1197 aaKnown RBP13.9□□□□□ -0.18
HDAC1-209ENST00000484305 DUSP12Q9UNI6 340 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 SLC27A5Q9Y2P5 690 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 MRPS23Q9Y3D9 190 aaKnown RBP13.9□□□□□ -0.18
HDAC1-209ENST00000484305 NUMBLQ9Y6R0 609 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 NRG2O14511 850 aaPredicted RBP13.89□□□□□ -0.19
HDAC1-209ENST00000484305 DLATP10515 647 aaKnown RBP13.89□□□□□ -0.19
HDAC1-209ENST00000484305 CCR2P41597 374 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 RBP5P82980 135 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 CYP24A1Q07973 514 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 DPYDQ12882 1025 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 BFSP1Q12934 665 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 DUOXA2Q1HG44 320 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 SLC39A12Q504Y0 691 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 PRSS36Q5K4E3 855 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 LRRTM3Q86VH5 581 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 WDR49Q8IV35 697 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 SUGP1Q8IWZ8 645 aaKnown RBP13.89□□□□□ -0.19
HDAC1-209ENST00000484305 C12orf56Q8IXR9 622 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 HS6ST3Q8IZP7 471 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 THEM5Q8N1Q8 247 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 ELMOD1Q8N336 334 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 NXPE3Q969Y0 559 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 ZNF512Q96ME7 567 aaPredicted RBP13.89□□□□□ -0.19
HDAC1-209ENST00000484305 L1RE1Q9UN81 338 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 YIPF1Q9Y548 306 aa13.89□□□□□ -0.19
HDAC1-209ENST00000484305 SOAT2O75908 522 aa13.88□□□□□ -0.19
HDAC1-209ENST00000484305 TNNC2P02585 160 aa13.88□□□□□ -0.19
HDAC1-209ENST00000484305 CEBPBP17676 345 aa13.88□□□□□ -0.19
HDAC1-209ENST00000484305 PSMD6Q15008 389 aa13.88□□□□□ -0.19
HDAC1-209ENST00000484305 IQCEQ6IPM2 695 aa13.88□□□□□ -0.19
HDAC1-209ENST00000484305 PDCL2Q8N4E4 241 aa13.88□□□□□ -0.19
HDAC1-209ENST00000484305 CCDC127Q96BQ5 260 aa13.88□□□□□ -0.19
HDAC1-209ENST00000484305 MCRS1Q96EZ8 462 aa13.88□□□□□ -0.19
HDAC1-209ENST00000484305 CGRRF1Q99675 332 aa13.88□□□□□ -0.19
HDAC1-209ENST00000484305 GZF1Q9H116 711 aaPredicted RBP13.88□□□□□ -0.19
HDAC1-209ENST00000484305 DNAJC25Q9H1X3 360 aa13.88□□□□□ -0.19
HDAC1-209ENST00000484305 KCTD10Q9H3F6 313 aa13.88□□□□□ -0.19
HDAC1-209ENST00000484305 GDAP2Q9NXN4 497 aa13.88□□□□□ -0.19
HDAC1-209ENST00000484305 SNX9Q9Y5X1 595 aa13.88□□□□□ -0.19
HDAC1-209ENST00000484305 EXOC3O60645 756 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 HUS1O60921 280 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 MOSPD3O75425 235 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 RHOBTB3O94955 611 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 CFHP08603 1231 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 MYL4P12829 197 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 TNNI1P19237 187 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 VCPP55072 806 aaKnown RBP13.87□□□□□ -0.19
HDAC1-209ENST00000484305 MYO1EQ12965 1108 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 SOWAHAQ2M3V2 549 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 IER5LQ5T953 404 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 CYP4A22Q5TCH4 519 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 PDZD4Q76G19 769 aaPredicted RBP13.87□□□□□ -0.19
HDAC1-209ENST00000484305 TRAPPC11Q7Z392 1133 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 PLEKHO2Q8TD55 490 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 ZNF516Q92618 1163 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 HPDLQ96IR7 371 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 FNBP1Q96RU3 617 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 KXD1Q9BQD3 176 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 LRRC3Q9BY71 257 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 DMAC2Q9NW81 257 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 GDE1Q9NZC3 331 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 HSFX1Q9UBD0 423 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 FBXL21Q9UKT6 434 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 ARIH1Q9Y4X5 557 aaPredicted RBP13.87□□□□□ -0.19
HDAC1-209ENST00000484305 MUC6Q6W4X9 2439 aa13.87□□□□□ -0.19
HDAC1-209ENST00000484305 PDXKO00764 312 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 ZNF197O14709 1029 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 HCRTO43612 131 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 PRPF40AO75400 957 aaKnown RBP13.86□□□□□ -0.19
HDAC1-209ENST00000484305 MICAL2O94851 1124 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 CST3P01034 146 aaPredicted RBP13.86□□□□□ -0.19
HDAC1-209ENST00000484305 SRFP11831 508 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 GJA1P17302 382 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 ACAT1P24752 427 aaKnown RBP13.86□□□□□ -0.19
HDAC1-209ENST00000484305 AVPR2P30518 371 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 ALDH1A3P47895 512 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 CASP4P49662 377 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 EPHB3P54753 998 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 EPHA5P54756 1037 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 PLD1Q13393 1074 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 MTSS1LQ765P7 747 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 OSTM1Q86WC4 334 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 FMR1NBQ8N0W7 255 aaPredicted RBP13.86□□□□□ -0.19
HDAC1-209ENST00000484305 SIX5Q8N196 739 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 TMEM86AQ8N2M4 240 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 TOP6BLQ8N6T0 577 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 GOLGA5Q8TBA6 731 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 GPR152Q8TDT2 470 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 ZSWIM3Q96MP5 696 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 SEPT5Q99719 369 aaPredicted RBP13.86□□□□□ -0.19
HDAC1-209ENST00000484305 ASAH2Q9NR71 780 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 TMLHEQ9NVH6 421 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 DDX43Q9NXZ2 648 aaKnown RBP13.86□□□□□ -0.19
HDAC1-209ENST00000484305 WNT16Q9UBV4 365 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 MAPK8IP1Q9UQF2 711 aa13.86□□□□□ -0.19
HDAC1-209ENST00000484305 R3HCC1Q9Y3T6 440 aaKnown RBP13.86□□□□□ -0.19
HDAC1-209ENST00000484305 WDFY4Q6ZS81 3184 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms