RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 TRAPPC12Q8WVT3 735 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 KAT2BQ92831 832 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 VWCEQ96DN2 955 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 MRPL38Q96DV4 380 aaKnown RBP5.8□□□□□ -1.48
COL17A1-206ENST00000483876 SCLYQ96I15 445 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 VCPIP1Q96JH7 1222 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 KREMEN1Q96MU8 473 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 TGS1Q96RS0 853 aaKnown RBP5.8□□□□□ -1.48
COL17A1-206ENST00000483876 CARD6Q9BX69 1037 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 GCOM2Q9BZD3 368 aaPredicted RBP5.8□□□□□ -1.48
COL17A1-206ENST00000483876 WNT8AQ9H1J5 351 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 ADAMTS10Q9H324 1103 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 VRTNQ9H8Y1 702 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 C1orf112Q9NSG2 853 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 TRIM10Q9UDY6 481 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 NOCTQ9UK39 431 aaKnown RBP5.8□□□□□ -1.48
COL17A1-206ENST00000483876 AJAP1Q9UKB5 411 aaPredicted RBP5.8□□□□□ -1.48
COL17A1-206ENST00000483876 SNX12Q9UMY4 172 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 DERAQ9Y315 318 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 EP300Q09472 2414 aaPredicted RBP5.8□□□□□ -1.48
COL17A1-206ENST00000483876 SIP14410 1827 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 MCM3APO60318 1980 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 A0A087WZ62 844 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 TTLL13PA6NNM8 815 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 PRR5-ARHGAP8B1AHC4 643 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 CYP26A1O43174 497 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 PHACTR2O75167 634 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 GPR32O75388 356 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 MTA2O94776 668 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 MOCS3O95396 460 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 VNN1O95497 513 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 STAU1O95793 577 aaKnown RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 HLA-DRAP01903 254 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 FTLP02792 175 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 ATP1A1P05023 1023 aaKnown RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 EDN1P05305 212 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 IQCF3P0C7M6 154 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 ZNF286BP0CG31 522 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 SMIM10L2AP0DMW4 78 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 SMIM10L2BP0DMW5 78 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 MYBL1P10243 752 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 CHRNB2P17787 502 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 ARF4P18085 180 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 ACO1P21399 889 aaKnown RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 LTBRP36941 435 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 PSEN2P49810 448 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 CLCN3P51790 818 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 GALCP54803 685 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 NAP1L1P55209 391 aaKnown RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 CHMP4BP1P59074 171 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 YWHAEP62258 255 aaKnown RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 GPC5P78333 572 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 ARHGAP8P85298 464 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 RING1Q06587 406 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 CUL2Q13617 745 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 NCOA4Q13772 614 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 MFSD10Q14728 455 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 CBX2Q14781 532 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 ANGPT1Q15389 498 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 FSCN1Q16658 493 aaKnown RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 DCAF4L1Q3SXM0 396 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 ZNF568Q3ZCX4 644 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 ASTLQ6HA08 431 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 ACAD10Q6JQN1 1059 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 TAF2Q6P1X5 1199 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 TRIM72Q6ZMU5 477 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 DEFB128Q7Z7B8 93 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 RPAINQ86UA6 219 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 TLK2Q86UE8 772 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 CREG2Q8IUH2 290 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 GLYCTKQ8IVS8 523 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 LRRC57Q8N9N7 239 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 TPCN2Q8NHX9 752 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 LNX1Q8TBB1 728 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 EPS8L1Q8TE68 723 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 CTNNBL1Q8WYA6 563 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 RFFLQ8WZ73 363 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 DDX1Q92499 740 aaKnown RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 GOLGA1Q92805 767 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 TATDN2Q93075 761 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 PBKQ96KB5 322 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 NLRP4Q96MN2 994 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 RPS6KC1Q96S38 1066 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 FDXACB1Q9BRP7 624 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 ADPGKQ9BRR6 497 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 ZBED2Q9BTP6 218 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 TLR10Q9BXR5 811 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 IMPG2Q9BZV3 1241 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 UPF3AQ9H1J1 476 aaKnown RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 MINDY3Q9H8M7 445 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 RPF1Q9H9Y2 349 aaKnown RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 SPC25Q9HBM1 224 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 ABCB6Q9NP58 842 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 SETD4Q9NVD3 440 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 ANKFY1Q9P2R3 1169 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 SALL4Q9UJQ4 1053 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 TTC7AQ9ULT0 858 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 AKT3Q9Y243 479 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 C2CD2Q9Y426 696 aa5.79□□□□□ -1.48
COL17A1-206ENST00000483876 HYOU1Q9Y4L1 999 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms