RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 NFX1Q12986 1120 aaKnown RBP27.91■■■□□ 2.06
SHOX2-204ENST00000483851 ZNF394Q53GI3 561 aa27.91■■■□□ 2.06
SHOX2-204ENST00000483851 WHAMMQ8TF30 809 aa27.91■■■□□ 2.06
SHOX2-204ENST00000483851 TMEM176AQ96HP8 235 aa27.91■■■□□ 2.06
SHOX2-204ENST00000483851 ZNF560Q96MR9 790 aa27.91■■■□□ 2.06
SHOX2-204ENST00000483851 RHOXF2Q9BQY4 288 aa27.91■■■□□ 2.06
SHOX2-204ENST00000483851 RNF39Q9H2S5 420 aa27.91■■■□□ 2.06
SHOX2-204ENST00000483851 MRPL47Q9HD33 250 aaKnown RBP27.91■■■□□ 2.06
SHOX2-204ENST00000483851 ADAM22Q9P0K1 906 aa27.91■■■□□ 2.06
SHOX2-204ENST00000483851 TUBGCP4Q9UGJ1 667 aa27.91■■■□□ 2.06
SHOX2-204ENST00000483851 BRD2P25440 801 aaKnown RBP27.9■■■□□ 2.06
SHOX2-204ENST00000483851 CXCR5P32302 372 aa27.9■■■□□ 2.06
SHOX2-204ENST00000483851 CDH8P55286 799 aa27.9■■■□□ 2.06
SHOX2-204ENST00000483851 CXCL16Q9H2A7 254 aa27.9■■■□□ 2.06
SHOX2-204ENST00000483851 PRDM10Q9NQV6 1147 aa27.9■■■□□ 2.06
SHOX2-204ENST00000483851 ALG6Q9Y672 507 aa27.9■■■□□ 2.06
SHOX2-204ENST00000483851 ZNF623O75123 536 aa27.89■■■□□ 2.06
SHOX2-204ENST00000483851 MMP8P22894 467 aa27.89■■■□□ 2.06
SHOX2-204ENST00000483851 RAP1GAPP47736 663 aa27.89■■■□□ 2.06
SHOX2-204ENST00000483851 VSNL1P62760 191 aa27.89■■■□□ 2.06
SHOX2-204ENST00000483851 MRPL10Q7Z7H8 261 aaKnown RBP27.89■■■□□ 2.06
SHOX2-204ENST00000483851 SLC4A11Q8NBS3 891 aa27.89■■■□□ 2.06
SHOX2-204ENST00000483851 GOLPH3Q9H4A6 298 aa27.89■■■□□ 2.06
SHOX2-204ENST00000483851 PACSIN2Q9UNF0 486 aaPredicted RBP27.89■■■□□ 2.06
SHOX2-204ENST00000483851 PHF24Q9UPV7 400 aa27.89■■■□□ 2.06
SHOX2-204ENST00000483851 PTCH2Q9Y6C5 1203 aa27.89■■■□□ 2.06
SHOX2-204ENST00000483851 SCINQ9Y6U3 715 aa27.89■■■□□ 2.06
SHOX2-204ENST00000483851 A0A0U1RQG5 324 aaPredicted RBP27.89■■■□□ 2.05
SHOX2-204ENST00000483851 KCNK3O14649 394 aa27.89■■■□□ 2.05
SHOX2-204ENST00000483851 CALB1P05937 261 aa27.89■■■□□ 2.05
SHOX2-204ENST00000483851 CFHP08603 1231 aa27.89■■■□□ 2.05
SHOX2-204ENST00000483851 VDRP11473 427 aa27.89■■■□□ 2.05
SHOX2-204ENST00000483851 HTRA3P83110 453 aa27.89■■■□□ 2.05
SHOX2-204ENST00000483851 PAK2Q13177 524 aa27.89■■■□□ 2.05
SHOX2-204ENST00000483851 TFAP2BQ92481 460 aa27.89■■■□□ 2.05
SHOX2-204ENST00000483851 C18orf25Q96B23 403 aaPredicted RBP27.89■■■□□ 2.05
SHOX2-204ENST00000483851 PSMB7Q99436 277 aa27.89■■■□□ 2.05
SHOX2-204ENST00000483851 ZSWIM1Q9BR11 485 aa27.89■■■□□ 2.05
SHOX2-204ENST00000483851 TRMT13Q9NUP7 481 aaKnown RBP27.89■■■□□ 2.05
SHOX2-204ENST00000483851 SLC38A7Q9NVC3 462 aa27.89■■■□□ 2.05
SHOX2-204ENST00000483851 LCMT1Q9UIC8 334 aa27.89■■■□□ 2.05
SHOX2-204ENST00000483851 PADI3Q9ULW8 664 aa27.89■■■□□ 2.05
SHOX2-204ENST00000483851 TRIM17Q9Y577 477 aa27.89■■■□□ 2.05
SHOX2-204ENST00000483851 ITGA4P13612 1032 aa27.88■■■□□ 2.05
SHOX2-204ENST00000483851 LRPAP1P30533 357 aa27.88■■■□□ 2.05
SHOX2-204ENST00000483851 PTP4A2Q12974 167 aa27.88■■■□□ 2.05
SHOX2-204ENST00000483851 GLRA4Q5JXX5 417 aa27.88■■■□□ 2.05
SHOX2-204ENST00000483851 ACTRT1Q8TDG2 376 aa27.88■■■□□ 2.05
SHOX2-204ENST00000483851 AGO3Q9H9G7 860 aaKnown RBP27.88■■■□□ 2.05
SHOX2-204ENST00000483851 GDAP2Q9NXN4 497 aa27.88■■■□□ 2.05
SHOX2-204ENST00000483851 GIT1Q9Y2X7 761 aa27.88■■■□□ 2.05
SHOX2-204ENST00000483851 A0A1W2PQ45 241 aaPredicted RBP27.87■■■□□ 2.05
SHOX2-204ENST00000483851 A0A1W2PQY0 241 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 RRM1P23921 792 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 STILQ15468 1287 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 CLUL1Q15846 466 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 PLEKHA7Q6IQ23 1121 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 PASD1Q8IV76 773 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 SPATA4Q8NEY3 305 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 NT5C1AQ9BXI3 368 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 ELOVL4Q9GZR5 314 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.87■■■□□ 2.058e-6■■□□□ 13.3
SHOX2-204ENST00000483851 STARD7Q9NQZ5 370 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 KLK14Q9P0G3 267 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 L1RE1Q9UN81 338 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 SCN1AP35498 2009 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 ATMINO43313 823 aaPredicted RBP27.87■■■□□ 2.05
SHOX2-204ENST00000483851 SKIP12755 728 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 CD19P15391 556 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 CNGA2Q16280 664 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 UNC93AQ86WB7 457 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 MMGT1Q8N4V1 131 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 PPP1R10Q96QC0 940 aaKnown RBP27.87■■■□□ 2.05
SHOX2-204ENST00000483851 DNAI2Q9GZS0 605 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 WNT8AQ9H1J5 351 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 CARD9Q9H257 536 aa27.87■■■□□ 2.05
SHOX2-204ENST00000483851 TARSL2A2RTX5 802 aaKnown RBP27.86■■■□□ 2.05
SHOX2-204ENST00000483851 KBTBD13C9JR72 458 aa27.86■■■□□ 2.05
SHOX2-204ENST00000483851 ERLIN1O75477 346 aa27.86■■■□□ 2.05
SHOX2-204ENST00000483851 FAM163BP0C2L3 166 aa27.86■■■□□ 2.05
SHOX2-204ENST00000483851 DSC3Q14574 896 aa27.86■■■□□ 2.05
SHOX2-204ENST00000483851 LPIN1Q14693 890 aa27.86■■■□□ 2.05
SHOX2-204ENST00000483851 TMEM130Q8N3G9 435 aa27.86■■■□□ 2.05
SHOX2-204ENST00000483851 C11orf70Q9BRQ4 267 aa27.86■■■□□ 2.05
SHOX2-204ENST00000483851 ST7Q9NRC1 585 aa27.86■■■□□ 2.05
SHOX2-204ENST00000483851 PARVAQ9NVD7 372 aa27.86■■■□□ 2.05
SHOX2-204ENST00000483851 TTC7AQ9ULT0 858 aaPredicted RBP27.86■■■□□ 2.05
SHOX2-204ENST00000483851 SNX9Q9Y5X1 595 aa27.86■■■□□ 2.05
SHOX2-204ENST00000483851 NDST1P52848 882 aa27.85■■■□□ 2.05
SHOX2-204ENST00000483851 DMTNQ08495 405 aa27.85■■■□□ 2.05
SHOX2-204ENST00000483851 MESDQ14696 234 aa27.85■■■□□ 2.05
SHOX2-204ENST00000483851 SV2CQ496J9 727 aa27.85■■■□□ 2.05
SHOX2-204ENST00000483851 FAM43BQ6ZT52 329 aaPredicted RBP27.85■■■□□ 2.05
SHOX2-204ENST00000483851 RASGEF1CQ8N431 466 aa27.85■■■□□ 2.05
SHOX2-204ENST00000483851 UBL4BQ8N7F7 174 aa27.85■■■□□ 2.05
SHOX2-204ENST00000483851 BEGAINQ9BUH8 593 aa27.85■■■□□ 2.05
SHOX2-204ENST00000483851 STRIP2Q9ULQ0 834 aa27.85■■■□□ 2.05
SHOX2-204ENST00000483851 PTGESO14684 152 aa27.85■■■□□ 2.05
SHOX2-204ENST00000483851 DDX3YO15523 660 aaKnown RBP27.85■■■□□ 2.05
SHOX2-204ENST00000483851 CD52P31358 61 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms