RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 RPS6KC1Q96S38 1066 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 OSBPL7Q9BZF2 842 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 AVENQ9NQS1 362 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 DPP3Q9NY33 737 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 TUBGCP4Q9UGJ1 667 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 AMACRQ9UHK6 382 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 C2CD2Q9Y426 696 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 PTCH2Q9Y6C5 1203 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 C17orf102A2RUQ5 167 aa9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 HEXIM1O94992 359 aaKnown RBP9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 TUBBP07437 444 aa9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 CARSP49589 748 aaKnown RBP9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 POU5F1Q01860 360 aaKnown RBP9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 GUCY2DQ02846 1103 aa9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 CACNB2Q08289 660 aaPredicted RBP9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 CASP8Q14790 479 aa9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 ZBTB6Q15916 424 aa9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 UBXN11Q5T124 520 aa9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 NOTUMQ6P988 496 aa9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 SLC4A11Q8NBS3 891 aa9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 APOL6Q9BWW8 343 aa9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 ELOVL4Q9GZR5 314 aa9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 VRTNQ9H8Y1 702 aa9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 PRDM16Q9HAZ2 1276 aa9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 EPB41L5Q9HCM4 733 aa9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 KLK14Q9P0G3 267 aa9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 TTC7AQ9ULT0 858 aaPredicted RBP9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 PIN4Q9Y237 131 aaKnown RBP9.4□□□□□ -0.9
CDC42SE1-204ENST00000483763 TCRBV5S1A1TA0A578 114 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 SPOPO43791 374 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 CILPO75339 1184 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 RECQL4O94761 1208 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 MYCNP04198 464 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 CCND3P30281 292 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 CTNNA1P35221 906 aaKnown RBP9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 GJA9P57773 515 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 NBPF20Q3BBV1 942 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 PLEKHA7Q6IQ23 1121 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 DENND1BQ6P3S1 775 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 TRIM72Q6ZMU5 477 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 ARRDC4Q8NCT1 418 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 AENQ8WTP8 325 aaKnown RBP9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 SNX27Q96L92 541 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 CELF4Q9BZC1 486 aaKnown RBP9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 UBXN6Q9BZV1 441 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 NME7Q9Y5B8 376 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 PCDHA3Q9Y5H8 950 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 SCN1AP35498 2009 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 CITO14578 2027 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 MEIS3P2A8K0S8 358 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 MIF4GDA9UHW6 222 aaKnown RBP9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 MYO1FO00160 1098 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 ATP8B1O43520 1251 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 ERLIN1O75477 346 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 CD19P15391 556 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 TCF4P15884 667 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 IGFBP6P24592 240 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 CDC42EP1Q00587 391 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 DCAF4L1Q3SXM0 396 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 GLE1Q53GS7 698 aaKnown RBP9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 CYP4A22Q5TCH4 519 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 GDF6Q6KF10 455 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 CALR3Q96L12 384 aaKnown RBP9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 HERPUD2Q9BSE4 406 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 KATNAL1Q9BW62 490 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 WNT8AQ9H1J5 351 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 GDF3Q9NR23 364 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 GRIN2DO15399 1336 aa9.39□□□□□ -0.91
CDC42SE1-204ENST00000483763 ADAMTS4O75173 837 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 FAM153BP0C7A2 387 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 MYBL1P10243 752 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 ATICP31939 592 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 CDH5P33151 784 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 OGDHQ02218 1023 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 C1QBPQ07021 282 aaKnown RBP9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 ZNF252P-AS1Q0IIN9 211 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 MTFR1Q15390 333 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 KYAT1Q16773 422 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 FAM153CQ494X1 144 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 PTPN20Q4JDL3 420 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 HDXQ7Z353 690 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 ANKS1BQ7Z6G8 1248 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 DDX42Q86XP3 938 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 KRT222Q8N1A0 295 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 UBL4BQ8N7F7 174 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 C12orf29Q8N999 325 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 CASKIN2Q8WXE0 1202 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 VCPIP1Q96JH7 1222 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 TRIM6Q9C030 488 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 FAM153AQ9UHL3 310 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 GTF2IRD1Q9UHL9 959 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 ITGA11Q9UKX5 1188 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 NFU1Q9UMS0 254 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 PCDHGC3Q9UN70 934 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 PTPN22Q9Y2R2 807 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 H3BQF6 201 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 TLR3O15455 904 aaKnown RBP9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 TTI1O43156 1089 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 SEPT4O43236 478 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 HCRTO43612 131 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms