RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 TMEM125Q96AQ2 219 aa7.04□□□□□ -1.28
PMS1-219ENST00000483293 CNPPD1Q9BV87 410 aa7.04□□□□□ -1.28
PMS1-219ENST00000483293 TRIM54Q9BYV2 358 aa7.04□□□□□ -1.28
PMS1-219ENST00000483293 LRRC27Q9C0I9 530 aa7.04□□□□□ -1.28
PMS1-219ENST00000483293 ZNF703Q9H7S9 590 aaPredicted RBP7.04□□□□□ -1.28
PMS1-219ENST00000483293 CHST12Q9NRB3 414 aa7.04□□□□□ -1.28
PMS1-219ENST00000483293 MYO1CO00159 1063 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 MYO1FO00160 1098 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 ABHD16AO95870 558 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 LAG3P18627 525 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 PIK3CBP42338 1070 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 FPGSQ05932 587 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 PIGFQ07326 219 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 SLC13A2Q13183 592 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 TUBA3CQ13748 450 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 PUM1Q14671 1186 aaKnown RBP eCLIP7.03□□□□□ -1.28
PMS1-219ENST00000483293 GEN1Q17RS7 908 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 PREPLQ4J6C6 727 aaPredicted RBP7.03□□□□□ -1.28
PMS1-219ENST00000483293 AMOTQ4VCS5 1084 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 TIGD2Q4W5G0 525 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 EMC10Q5UCC4 262 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 TAF2Q6P1X5 1199 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 TUBA3EQ6PEY2 450 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 DNAJC5GQ8N7S2 189 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 PSD4Q8NDX1 1056 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 CACTINQ8WUQ7 758 aaKnown RBP7.03□□□□□ -1.28
PMS1-219ENST00000483293 NACC2Q96BF6 587 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 ZNF503Q96F45 646 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 NAA15Q9BXJ9 866 aaKnown RBP7.03□□□□□ -1.28
PMS1-219ENST00000483293 NUP62CLQ9H1M0 184 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 CTTNBP2NLQ9P2B4 639 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 TBC1D30Q9Y2I9 924 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 TMX2Q9Y320 296 aa7.03□□□□□ -1.28
PMS1-219ENST00000483293 CCDC195A0A1B0GUA6 201 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 RHPN2P1A8MT19 583 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 KPNA5O15131 536 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 SUN1O94901 812 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 HLA-DOAP06340 250 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 PIM1P11309 404 aaPredicted RBP7.02□□□□□ -1.29
PMS1-219ENST00000483293 DDX6P26196 483 aaKnown RBP eCLIP7.02□□□□□ -1.29
PMS1-219ENST00000483293 TP53BP2Q13625 1128 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 BEAN1Q3B7T3 259 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 FAM160B1Q5W0V3 765 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 KBTBD7Q8WVZ9 684 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 RAPGEF4Q8WZA2 1011 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 DDX17Q92841 729 aaKnown RBP7.02□□□□□ -1.29
PMS1-219ENST00000483293 SLC46A1Q96NT5 459 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 ADAM2Q99965 735 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 SLC52A1Q9NWF4 448 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 ETAA1Q9NY74 926 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 GPRC5BQ9NZH0 403 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 XPR1Q9UBH6 696 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 MED16Q9Y2X0 877 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 PLEKHM1Q9Y4G2 1056 aa7.02□□□□□ -1.29
PMS1-219ENST00000483293 CCDC194A0A1B0GVG4 234 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 PLIN1O60240 522 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 CHEK2O96017 543 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 SLC5A1P13866 664 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 KCNA2P16389 499 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 EN2P19622 333 aaPredicted RBP7.01□□□□□ -1.29
PMS1-219ENST00000483293 FDXRP22570 491 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 SLC11A2P49281 568 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 ARFIP2P53365 341 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 CYP2A13Q16696 494 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 LMBRD2Q68DH5 695 aaPredicted RBP7.01□□□□□ -1.29
PMS1-219ENST00000483293 CCSAPQ6IQ19 270 aaPredicted RBP7.01□□□□□ -1.29
PMS1-219ENST00000483293 SESTD1Q86VW0 696 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 SYNE4Q8N205 404 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 Q8NA96 180 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 MAML1Q92585 1016 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 HAS1Q92839 578 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 SIK2Q9H0K1 926 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 VPS11Q9H270 941 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 SMURF2Q9HAU4 748 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.01□□□□□ -1.29
PMS1-219ENST00000483293 RAD54BQ9Y620 910 aa7.01□□□□□ -1.29
PMS1-219ENST00000483293 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7□□□□□ -1.29
PMS1-219ENST00000483293 CENPVL1A0A0U1RR11 272 aa7□□□□□ -1.29
PMS1-219ENST00000483293 GAGE12BA1L429 117 aa7□□□□□ -1.29
PMS1-219ENST00000483293 GAGE12HA6NDE8 117 aa7□□□□□ -1.29
PMS1-219ENST00000483293 NPIPB8E9PQR5 432 aa7□□□□□ -1.29
PMS1-219ENST00000483293 CDKL5O76039 1030 aa7□□□□□ -1.29
PMS1-219ENST00000483293 TOB1P50616 345 aaPredicted RBP7□□□□□ -1.29
PMS1-219ENST00000483293 MXRA7P84157 204 aa7□□□□□ -1.29
PMS1-219ENST00000483293 PICALMQ13492 652 aa7□□□□□ -1.29
PMS1-219ENST00000483293 FNDC7Q5VTL7 733 aa7□□□□□ -1.29
PMS1-219ENST00000483293 IGFL4Q6B9Z1 124 aa7□□□□□ -1.29
PMS1-219ENST00000483293 CLNKQ7Z7G1 428 aa7□□□□□ -1.29
PMS1-219ENST00000483293 SKAP1Q86WV1 359 aa7□□□□□ -1.29
PMS1-219ENST00000483293 LIX1LQ8IVB5 337 aa7□□□□□ -1.29
PMS1-219ENST00000483293 SUCLG2Q96I99 432 aa7□□□□□ -1.29
PMS1-219ENST00000483293 MED15Q96RN5 788 aa7□□□□□ -1.29
PMS1-219ENST00000483293 STK31Q9BXU1 1019 aa7□□□□□ -1.29
PMS1-219ENST00000483293 MS4A7Q9GZW8 240 aaPredicted RBP7□□□□□ -1.29
PMS1-219ENST00000483293 MMRN2Q9H8L6 949 aa7□□□□□ -1.29
PMS1-219ENST00000483293 HESX1Q9UBX0 185 aa7□□□□□ -1.29
PMS1-219ENST00000483293 KCNE5Q9UJ90 142 aa7□□□□□ -1.29
PMS1-219ENST00000483293 F5H697 171 aa6.99□□□□□ -1.29
PMS1-219ENST00000483293 F8W8V4 182 aa6.99□□□□□ -1.29
PMS1-219ENST00000483293 FRS3O43559 492 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms