RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 CST3P01034 146 aaPredicted RBP9.42□□□□□ -0.9
SNX4-205ENST00000482965 C4BPAP04003 597 aaKnown RBP9.42□□□□□ -0.9
SNX4-205ENST00000482965 OR4Q2P0C623 313 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 TRIM49P0CI25 452 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 TRIM49CP0CI26 452 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 ATICP31939 592 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 PIK3CAP42336 1068 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 STX17P56962 302 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 MYL6P60660 151 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 TNNC1P63316 161 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 ENPEPQ07075 957 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 NCOA4Q13772 614 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 CBX2Q14781 532 aaPredicted RBP9.42□□□□□ -0.9
SNX4-205ENST00000482965 TCERG1LQ5VWI1 586 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 TPGS2Q68CL5 300 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 C15orf39Q6ZRI6 1047 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 GPR149Q86SP6 731 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 ZC3H3Q8IXZ2 948 aaKnown RBP9.42□□□□□ -0.9
SNX4-205ENST00000482965 ADGRF2Q8IZF7 708 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 TMEM86AQ8N2M4 240 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 PDCL2Q8N4E4 241 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 TOP6BLQ8N6T0 577 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 SLC7A14Q8TBB6 771 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 GPT2Q8TD30 523 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 SMG7Q92540 1137 aaKnown RBP9.42□□□□□ -0.9
SNX4-205ENST00000482965 SYAP1Q96A49 352 aaPredicted RBP9.42□□□□□ -0.9
SNX4-205ENST00000482965 CEP63Q96MT8 703 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 NECTIN4Q96NY8 510 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 NECAB3Q96P71 396 aaPredicted RBP9.42□□□□□ -0.9
SNX4-205ENST00000482965 MMS19Q96T76 1030 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 MMRN2Q9H8L6 949 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 CYP4F11Q9HBI6 524 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 PRKAG3Q9UGI9 489 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 AFF4Q9UHB7 1163 aaKnown RBP9.42□□□□□ -0.9
SNX4-205ENST00000482965 L1RE1Q9UN81 338 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 CCL16O15467 120 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 STX10O60499 249 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 XYLBO75191 536 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 VNN1O95497 513 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 STAU1O95793 577 aaKnown RBP9.41□□□□□ -0.9
SNX4-205ENST00000482965 HNRNPA1P09651 372 aaKnown RBP eCLIP9.41□□□□□ -0.9
SNX4-205ENST00000482965 ATF2P15336 505 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 SSTR3P32745 418 aaPredicted RBP9.41□□□□□ -0.9
SNX4-205ENST00000482965 GCLMP48507 274 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 MYL7Q01449 175 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 TSPY1Q01534 308 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 ADCY1Q08828 1119 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 GPR17Q13304 367 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 SOWAHAQ2M3V2 549 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 UVSSAQ2YD98 709 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 ZNF699Q32M78 642 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 WDR72Q3MJ13 1102 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 ZACNQ401N2 412 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 CCDC40Q4G0X9 1142 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 DCAF17Q5H9S7 520 aaPredicted RBP9.41□□□□□ -0.9
SNX4-205ENST00000482965 ZNF667Q5HYK9 610 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 C1orf220Q5T0J3 134 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 TTI2Q6NXR4 508 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 FOXR2Q6PJQ5 311 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 CYP26C1Q6V0L0 522 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 RNF19BQ6ZMZ0 732 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 SV2AQ7L0J3 742 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 RTL10Q7L3V2 364 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 DPH6Q7L8W6 267 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 OSTM1Q86WC4 334 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 ADHFE1Q8IWW8 467 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 MLKLQ8NB16 471 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 OR10T2Q8NGX3 314 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 FEZF2Q8TBJ5 459 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 SPATA18Q8TC71 538 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 PGLYRP2Q96PD5 576 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 TMEM209Q96SK2 561 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 DUSP9Q99956 384 aaKnown RBP9.41□□□□□ -0.9
SNX4-205ENST00000482965 RTP3Q9BQQ7 232 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 PHF7Q9BWX1 381 aaPredicted RBP9.41□□□□□ -0.9
SNX4-205ENST00000482965 COL25A1Q9BXS0 654 aaPredicted RBP9.41□□□□□ -0.9
SNX4-205ENST00000482965 PRKD2Q9BZL6 878 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 POMKQ9H5K3 350 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 DDX43Q9NXZ2 648 aaKnown RBP9.41□□□□□ -0.9
SNX4-205ENST00000482965 NXF1Q9UBU9 619 aaKnown RBP9.41□□□□□ -0.9
SNX4-205ENST00000482965 ARMCX3Q9UH62 379 aaPredicted RBP9.41□□□□□ -0.9
SNX4-205ENST00000482965 MAFFQ9ULX9 164 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 POLIQ9UNA4 740 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 MYO10Q9HD67 2058 aa9.41□□□□□ -0.9
SNX4-205ENST00000482965 TTC28Q96AY4 2481 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 DOCK8Q8NF50 2099 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 MTMR11A4FU01 709 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 SEC24AO95486 1093 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 FGFR1OPO95684 399 aaKnown RBP9.4□□□□□ -0.9
SNX4-205ENST00000482965 HLA-DRAP01903 254 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 LRG1P02750 347 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 P4HA1P13674 534 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 SP100P23497 879 aaPredicted RBP9.4□□□□□ -0.9
SNX4-205ENST00000482965 ACAT1P24752 427 aaKnown RBP9.4□□□□□ -0.9
SNX4-205ENST00000482965 PCSK1P29120 753 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 HOXA9P31269 272 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 GTF2H1P32780 548 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 LHX1P48742 406 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 MXI1P50539 228 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 NLRP12P59046 1061 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms