RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 PCSK1P29120 753 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 TKTP29401 623 aaKnown RBP16.41■□□□□ 0.22
CCM2-215ENST00000482714 ASPAP45381 313 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 ERVFC1P60507 584 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 INCA1Q0VD86 236 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 SYCP1Q15431 976 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 RTP2Q5QGT7 225 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 SPOPLQ6IQ16 392 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 ZNF280DQ6N043 979 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 SPRED2Q7Z698 418 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 ADGRF2Q8IZF7 708 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 MICAL1Q8TDZ2 1067 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 RIN2Q8WYP3 895 aaPredicted RBP16.41■□□□□ 0.22
CCM2-215ENST00000482714 MRPL38Q96DV4 380 aaKnown RBP16.41■□□□□ 0.22
CCM2-215ENST00000482714 EMILIN2Q9BXX0 1053 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 TTYH1Q9H313 450 aaPredicted RBP16.41■□□□□ 0.22
CCM2-215ENST00000482714 SNX25Q9H3E2 840 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 UBE2TQ9NPD8 197 aaPredicted RBP16.41■□□□□ 0.22
CCM2-215ENST00000482714 MTRRQ9UBK8 725 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 MAFFQ9ULX9 164 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 BARX2Q9UMQ3 279 aaPredicted RBP16.41■□□□□ 0.22
CCM2-215ENST00000482714 STXBP5LQ9Y2K9 1186 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 NLRC5Q86WI3 1866 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 FSD2A1L4K1 749 aa16.4■□□□□ 0.22
CCM2-215ENST00000482714 CLSTN1O94985 981 aa16.4■□□□□ 0.22
CCM2-215ENST00000482714 DNAJB1P25685 340 aa16.4■□□□□ 0.22
CCM2-215ENST00000482714 FIGNQ5HY92 759 aa16.4■□□□□ 0.22
CCM2-215ENST00000482714 SLC8B1Q6J4K2 584 aa16.4■□□□□ 0.22
CCM2-215ENST00000482714 DPY19L2P1Q6NXN4 242 aa16.4■□□□□ 0.22
CCM2-215ENST00000482714 FMNL3Q8IVF7 1028 aa16.4■□□□□ 0.22
CCM2-215ENST00000482714 CRYBG2Q8N1P7 616 aa16.4■□□□□ 0.22
CCM2-215ENST00000482714 PPM1KQ8N3J5 372 aa16.4■□□□□ 0.22
CCM2-215ENST00000482714 NEK11Q8NG66 645 aa16.4■□□□□ 0.22
CCM2-215ENST00000482714 PCMTD1Q96MG8 357 aaPredicted RBP16.4■□□□□ 0.22
CCM2-215ENST00000482714 STK33Q9BYT3 514 aa16.4■□□□□ 0.22
CCM2-215ENST00000482714 XPO4Q9C0E2 1151 aaKnown RBP16.4■□□□□ 0.22
CCM2-215ENST00000482714 ENTPD7Q9NQZ7 604 aa16.4■□□□□ 0.22
CCM2-215ENST00000482714 KIAA1257Q9ULG3 409 aa16.4■□□□□ 0.22
CCM2-215ENST00000482714 C2orf71A6NGG8 1288 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 UCHL3P15374 230 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 PBX1P40424 430 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 LRMPQ12912 555 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 PTPN14Q15678 1187 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 MAPRE1Q15691 268 aaKnown RBP16.39■□□□□ 0.21
CCM2-215ENST00000482714 PSMD5Q16401 504 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 CTXN3Q4LDR2 81 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 PPFIBP1Q86W92 1011 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 OR6B3Q8NGW1 331 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 KBTBD7Q8WVZ9 684 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 TNIP3Q96KP6 325 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 TRIM5Q9C035 493 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 SIX2Q9NPC8 291 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 CISHQ9NSE2 258 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 DDX43Q9NXZ2 648 aaKnown RBP16.39■□□□□ 0.21
CCM2-215ENST00000482714 CDH9Q9ULB4 789 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 POLIQ9UNA4 740 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 CNTN6Q9UQ52 1028 aa16.39■□□□□ 0.21
CCM2-215ENST00000482714 TIMM13Q9Y5L4 95 aaPredicted RBP16.39■□□□□ 0.21
CCM2-215ENST00000482714 KIAA1671Q9BY89 1806 aa16.38■□□□□ 0.21
CCM2-215ENST00000482714 WEE2P0C1S8 567 aa16.38■□□□□ 0.21
CCM2-215ENST00000482714 CDH8P55286 799 aa16.38■□□□□ 0.21
CCM2-215ENST00000482714 RAB33AQ14088 237 aa16.38■□□□□ 0.21
CCM2-215ENST00000482714 GRIN2CQ14957 1233 aa16.38■□□□□ 0.21
CCM2-215ENST00000482714 RTL10Q7L3V2 364 aa16.38■□□□□ 0.21
CCM2-215ENST00000482714 DCP1BQ8IZD4 617 aaKnown RBP16.38■□□□□ 0.21
CCM2-215ENST00000482714 CDCA3Q99618 268 aaPredicted RBP16.38■□□□□ 0.21
CCM2-215ENST00000482714 MRPL45Q9BRJ2 306 aaKnown RBP16.38■□□□□ 0.21
CCM2-215ENST00000482714 LSM14BQ9BX40 385 aaKnown RBP16.38■□□□□ 0.21
CCM2-215ENST00000482714 NT5C1AQ9BXI3 368 aa16.38■□□□□ 0.21
CCM2-215ENST00000482714 NAA15Q9BXJ9 866 aaKnown RBP16.38■□□□□ 0.21
CCM2-215ENST00000482714 DPP7Q9UHL4 492 aa16.38■□□□□ 0.21
CCM2-215ENST00000482714 DNAJC12Q9UKB3 198 aa16.38■□□□□ 0.21
CCM2-215ENST00000482714 MYO6Q9UM54 1294 aa16.38■□□□□ 0.21
CCM2-215ENST00000482714 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCM2-215ENST00000482714 ITIH6Q6UXX5 1313 aa16.38■□□□□ 0.21
CCM2-215ENST00000482714 EPOPA6NHQ4 379 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 A8MXQ7 604 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 NCK2O43639 380 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 CILPO75339 1184 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 ADH1AP07327 375 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 NDUFV1P49821 464 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 PLCB2Q00722 1185 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 TSPY1Q01534 308 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 GPR17Q13304 367 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 NFE2Q16621 373 aaPredicted RBP16.37■□□□□ 0.21
CCM2-215ENST00000482714 TPGS2Q68CL5 300 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 RRAGAQ7L523 313 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 ZNF461Q8TAF7 563 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 C2orf15Q8WU43 125 aaKnown RBP16.37■□□□□ 0.21
CCM2-215ENST00000482714 MRFAP1L1Q96HT8 127 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 KLHL5Q96PQ7 755 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 CLSTN3Q9BQT9 956 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 SMYD3Q9H7B4 428 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 HSFX1Q9UBD0 423 aa16.37■□□□□ 0.21
CCM2-215ENST00000482714 GOLGA6L3A6NEY3 463 aa16.36■□□□□ 0.21
CCM2-215ENST00000482714 NOL4O94818 638 aa16.36■□□□□ 0.21
CCM2-215ENST00000482714 ACO1P21399 889 aaKnown RBP16.36■□□□□ 0.21
CCM2-215ENST00000482714 BPIFB4P59827 614 aa16.36■□□□□ 0.21
CCM2-215ENST00000482714 FAM171BQ6P995 826 aa16.36■□□□□ 0.21
CCM2-215ENST00000482714 ARHGEF19Q8IW93 802 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms