RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 GPR17Q13304 367 aa22.45■■□□□ 1.18
SEC13-217ENST00000482647 CBX2Q14781 532 aaPredicted RBP22.45■■□□□ 1.18
SEC13-217ENST00000482647 SGSM1Q2NKQ1 1148 aa22.45■■□□□ 1.18
SEC13-217ENST00000482647 WDR72Q3MJ13 1102 aa22.45■■□□□ 1.18
SEC13-217ENST00000482647 GPR149Q86SP6 731 aa22.45■■□□□ 1.18
SEC13-217ENST00000482647 ADAMTS19Q8TE59 1207 aa22.45■■□□□ 1.18
SEC13-217ENST00000482647 MMS19Q96T76 1030 aa22.45■■□□□ 1.18
SEC13-217ENST00000482647 METTL14Q9HCE5 456 aaKnown RBP22.45■■□□□ 1.18
SEC13-217ENST00000482647 AFF4Q9UHB7 1163 aaKnown RBP22.45■■□□□ 1.18
SEC13-217ENST00000482647 PRRG1O14668 218 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 RFPL2O75678 378 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 CLSTN1O94985 981 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 FGFR1OPO95684 399 aaKnown RBP22.44■■□□□ 1.18
SEC13-217ENST00000482647 HNRNPA1P09651 372 aaKnown RBP eCLIP22.44■■□□□ 1.18
SEC13-217ENST00000482647 SCN1AP35498 2009 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 LHX1P48742 406 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 NLRP12P59046 1061 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 TNNC1P63316 161 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 PPP3CAQ08209 521 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 SOWAHAQ2M3V2 549 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 PPM1LQ5SGD2 360 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 LIMS2Q7Z4I7 341 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 FRMD5Q7Z6J6 570 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 TCEAL8Q8IYN2 117 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 OR10T2Q8NGX3 314 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 SLC7A14Q8TBB6 771 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 RTP3Q9BQQ7 232 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 RHOBTB2Q9BYZ6 727 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 PRKD2Q9BZL6 878 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 XYLT2Q9H1B5 865 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 VRTNQ9H8Y1 702 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 TMEM8AQ9HCN3 771 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 PRKAG3Q9UGI9 489 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 DACH1Q9UI36 760 aa22.44■■□□□ 1.18
SEC13-217ENST00000482647 PAPLNO95428 1278 aa22.43■■□□□ 1.18
SEC13-217ENST00000482647 VNN1O95497 513 aa22.43■■□□□ 1.18
SEC13-217ENST00000482647 WEE2P0C1S8 567 aa22.43■■□□□ 1.18
SEC13-217ENST00000482647 FAM163BP0C2L3 166 aa22.43■■□□□ 1.18
SEC13-217ENST00000482647 OR4Q2P0C623 313 aa22.43■■□□□ 1.18
SEC13-217ENST00000482647 MYL7Q01449 175 aa22.43■■□□□ 1.18
SEC13-217ENST00000482647 ADCY1Q08828 1119 aa22.43■■□□□ 1.18
SEC13-217ENST00000482647 ZNF699Q32M78 642 aa22.43■■□□□ 1.18
SEC13-217ENST00000482647 KRT39Q6A163 491 aa22.43■■□□□ 1.18
SEC13-217ENST00000482647 RNF19BQ6ZMZ0 732 aa22.43■■□□□ 1.18
SEC13-217ENST00000482647 ADGRF2Q8IZF7 708 aa22.43■■□□□ 1.18
SEC13-217ENST00000482647 TAF4BQ92750 862 aa22.43■■□□□ 1.18
SEC13-217ENST00000482647 ACBD6Q9BR61 282 aa22.43■■□□□ 1.18
SEC13-217ENST00000482647 ZCWPW1Q9H0M4 648 aa22.43■■□□□ 1.18
SEC13-217ENST00000482647 MMRN2Q9H8L6 949 aa22.43■■□□□ 1.18
SEC13-217ENST00000482647 CYP4F11Q9HBI6 524 aa22.43■■□□□ 1.18
SEC13-217ENST00000482647 DDX43Q9NXZ2 648 aaKnown RBP22.43■■□□□ 1.18
SEC13-217ENST00000482647 GNA14O95837 355 aa22.42■■□□□ 1.18
SEC13-217ENST00000482647 HOXA9P31269 272 aa22.42■■□□□ 1.18
SEC13-217ENST00000482647 PIK3CAP42336 1068 aa22.42■■□□□ 1.18
SEC13-217ENST00000482647 TSPY1Q01534 308 aa22.42■■□□□ 1.18
SEC13-217ENST00000482647 CCDC40Q4G0X9 1142 aa22.42■■□□□ 1.18
SEC13-217ENST00000482647 DCAF17Q5H9S7 520 aaPredicted RBP22.42■■□□□ 1.18
SEC13-217ENST00000482647 ZNF667Q5HYK9 610 aa22.42■■□□□ 1.18
SEC13-217ENST00000482647 CCDC183Q5T5S1 534 aa22.42■■□□□ 1.18
SEC13-217ENST00000482647 TCERG1LQ5VWI1 586 aa22.42■■□□□ 1.18
SEC13-217ENST00000482647 RBM43Q6ZSC3 357 aaKnown RBP22.42■■□□□ 1.18
SEC13-217ENST00000482647 DCP1BQ8IZD4 617 aaKnown RBP22.42■■□□□ 1.18
SEC13-217ENST00000482647 SMG7Q92540 1137 aaKnown RBP22.42■■□□□ 1.18
SEC13-217ENST00000482647 SRRTQ9BXP5 876 aaKnown RBP22.42■■□□□ 1.18
SEC13-217ENST00000482647 PIDD1Q9HB75 910 aa22.42■■□□□ 1.18
SEC13-217ENST00000482647 NXF1Q9UBU9 619 aaKnown RBP22.42■■□□□ 1.18
SEC13-217ENST00000482647 C5orf42Q9H799 3197 aa22.42■■□□□ 1.18
SEC13-217ENST00000482647 GABRDO14764 452 aa22.41■■□□□ 1.18
SEC13-217ENST00000482647 XYLBO75191 536 aa22.41■■□□□ 1.18
SEC13-217ENST00000482647 HLA-DRAP01903 254 aa22.41■■□□□ 1.18
SEC13-217ENST00000482647 P4HA1P13674 534 aa22.41■■□□□ 1.18
SEC13-217ENST00000482647 PCSK1P29120 753 aa22.41■■□□□ 1.18
SEC13-217ENST00000482647 SMARCB1Q12824 385 aa22.41■■□□□ 1.18
SEC13-217ENST00000482647 DPCR1Q3MIW9 517 aa22.41■■□□□ 1.18
SEC13-217ENST00000482647 SLC39A12Q504Y0 691 aa22.41■■□□□ 1.18
SEC13-217ENST00000482647 ADHFE1Q8IWW8 467 aa22.41■■□□□ 1.18
SEC13-217ENST00000482647 ZNF707Q96C28 371 aaPredicted RBP22.41■■□□□ 1.18
SEC13-217ENST00000482647 PGLYRP2Q96PD5 576 aa22.41■■□□□ 1.18
SEC13-217ENST00000482647 TMEM209Q96SK2 561 aa22.41■■□□□ 1.18
SEC13-217ENST00000482647 UHRF1Q96T88 793 aaPredicted RBP22.41■■□□□ 1.18
SEC13-217ENST00000482647 PHF7Q9BWX1 381 aaPredicted RBP22.41■■□□□ 1.18
SEC13-217ENST00000482647 IMPG2Q9BZV3 1241 aa22.41■■□□□ 1.18
SEC13-217ENST00000482647 TACC1O75410 805 aa22.4■■□□□ 1.18
SEC13-217ENST00000482647 SEC24AO95486 1093 aa22.4■■□□□ 1.18
SEC13-217ENST00000482647 WARSP23381 471 aaKnown RBP22.4■■□□□ 1.18
SEC13-217ENST00000482647 ERCC5P28715 1186 aaPredicted RBP22.4■■□□□ 1.18
SEC13-217ENST00000482647 GNL1P36915 607 aaPredicted RBP22.4■■□□□ 1.18
SEC13-217ENST00000482647 MXI1P50539 228 aa22.4■■□□□ 1.18
SEC13-217ENST00000482647 CT47A1Q5JQC4 288 aaPredicted RBP22.4■■□□□ 1.18
SEC13-217ENST00000482647 CCDC150Q8NCX0 1101 aa22.4■■□□□ 1.18
SEC13-217ENST00000482647 TAS1R2Q8TE23 839 aa22.4■■□□□ 1.18
SEC13-217ENST00000482647 C2orf15Q8WU43 125 aaKnown RBP22.4■■□□□ 1.18
SEC13-217ENST00000482647 KBTBD7Q8WVZ9 684 aa22.4■■□□□ 1.18
SEC13-217ENST00000482647 SNX25Q9H3E2 840 aa22.4■■□□□ 1.18
SEC13-217ENST00000482647 CDH22Q9UJ99 828 aa22.4■■□□□ 1.18
SEC13-217ENST00000482647 CCL16O15467 120 aa22.39■■□□□ 1.17
SEC13-217ENST00000482647 ASS1P00966 412 aaKnown RBP22.39■■□□□ 1.17
SEC13-217ENST00000482647 LRG1P02750 347 aa22.39■■□□□ 1.17
SEC13-217ENST00000482647 POU2F2P09086 479 aa22.39■■□□□ 1.17
SEC13-217ENST00000482647 LRRTM3Q86VH5 581 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms