RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 KIAA0319Q5VV43 1072 aa21.33■■□□□ 1
TRAPPC12-220ENST00000482645 ANKS3Q6ZW76 656 aa21.33■■□□□ 1
TRAPPC12-220ENST00000482645 TMC6Q7Z403 805 aa21.33■■□□□ 1
TRAPPC12-220ENST00000482645 MICALL1Q8N3F8 863 aa21.33■■□□□ 1
TRAPPC12-220ENST00000482645 NT5C1BQ96P26 610 aa21.33■■□□□ 1
TRAPPC12-220ENST00000482645 ATG2AQ2TAZ0 1938 aa21.33■■□□□ 1
TRAPPC12-220ENST00000482645 A0A1W2PQC6 194 aa21.32■■□□□ 1
TRAPPC12-220ENST00000482645 FSCN2O14926 492 aa21.32■■□□□ 1
TRAPPC12-220ENST00000482645 WEE2P0C1S8 567 aa21.32■■□□□ 1
TRAPPC12-220ENST00000482645 TYMPP19971 482 aa21.32■■□□□ 1
TRAPPC12-220ENST00000482645 ASPAP45381 313 aa21.32■■□□□ 1
TRAPPC12-220ENST00000482645 CDH8P55286 799 aa21.32■■□□□ 1
TRAPPC12-220ENST00000482645 APBA1Q02410 837 aa21.32■■□□□ 1
TRAPPC12-220ENST00000482645 CTXN3Q4LDR2 81 aa21.32■■□□□ 1
TRAPPC12-220ENST00000482645 ZNF280DQ6N043 979 aa21.32■■□□□ 1
TRAPPC12-220ENST00000482645 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.32■■□□□ 1
TRAPPC12-220ENST00000482645 RBM23Q86U06 439 aaKnown RBP21.32■■□□□ 1
TRAPPC12-220ENST00000482645 PPM1KQ8N3J5 372 aa21.32■■□□□ 1
TRAPPC12-220ENST00000482645 MRPL43Q8N983 215 aaKnown RBP21.32■■□□□ 1
TRAPPC12-220ENST00000482645 SPC24Q8NBT2 197 aa21.32■■□□□ 1
TRAPPC12-220ENST00000482645 LMO3Q8TAP4 145 aa21.32■■□□□ 1
TRAPPC12-220ENST00000482645 LNX1Q8TBB1 728 aaPredicted RBP21.32■■□□□ 1
TRAPPC12-220ENST00000482645 MYLIPQ8WY64 445 aa21.32■■□□□ 1
TRAPPC12-220ENST00000482645 PIK3R5Q8WYR1 880 aa21.32■■□□□ 1
TRAPPC12-220ENST00000482645 ERGIC2Q96RQ1 377 aa21.32■■□□□ 1
TRAPPC12-220ENST00000482645 MRPL45Q9BRJ2 306 aaKnown RBP21.32■■□□□ 1
TRAPPC12-220ENST00000482645 LSM14BQ9BX40 385 aaKnown RBP21.32■■□□□ 1
TRAPPC12-220ENST00000482645 SSX2IPQ9Y2D8 614 aa21.32■■□□□ 1
TRAPPC12-220ENST00000482645 GTPBP10A4D1E9 387 aaKnown RBP21.31■■□□□ 1
TRAPPC12-220ENST00000482645 C2orf71A6NGG8 1288 aa21.31■■□□□ 1
TRAPPC12-220ENST00000482645 CYP11A1P05108 521 aa21.31■■□□□ 1
TRAPPC12-220ENST00000482645 CD58P19256 250 aa21.31■■□□□ 1
TRAPPC12-220ENST00000482645 ARPP19P56211 112 aa21.31■■□□□ 1
TRAPPC12-220ENST00000482645 SPECC1LQ69YQ0 1117 aa21.31■■□□□ 1
TRAPPC12-220ENST00000482645 PDE12Q6L8Q7 609 aaKnown RBP21.31■■□□□ 1
TRAPPC12-220ENST00000482645 TRIM65Q6PJ69 517 aa21.31■■□□□ 1
TRAPPC12-220ENST00000482645 TMEM86AQ8N2M4 240 aa21.31■■□□□ 1
TRAPPC12-220ENST00000482645 OR6B3Q8NGW1 331 aa21.31■■□□□ 1
TRAPPC12-220ENST00000482645 CDX2Q99626 313 aaPredicted RBP21.31■■□□□ 1
TRAPPC12-220ENST00000482645 ARID3AQ99856 593 aa21.31■■□□□ 1
TRAPPC12-220ENST00000482645 SNX25Q9H3E2 840 aa21.31■■□□□ 1
TRAPPC12-220ENST00000482645 PRRC2BQ5JSZ5 2229 aaKnown RBP21.31■■□□□ 1
TRAPPC12-220ENST00000482645 H7C4K7 107 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 PER2O15055 1255 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 HCRTO43612 131 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 ACAT1P24752 427 aaKnown RBP21.3■■□□□ 1
TRAPPC12-220ENST00000482645 PON1P27169 355 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 KCNMA1Q12791 1236 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 PDXDC1Q6P996 788 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 RRAGAQ7L523 313 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 DPH6Q7L8W6 267 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 ADGRD2Q7Z7M1 963 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 ARHGEF19Q8IW93 802 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 THEM5Q8N1Q8 247 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 KBTBD7Q8WVZ9 684 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 GUCD1Q96NT3 240 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 EMILIN2Q9BXX0 1053 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 SDCBP2Q9H190 292 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 FAM207AQ9NSI2 230 aaPredicted RBP21.3■■□□□ 1
TRAPPC12-220ENST00000482645 DDX43Q9NXZ2 648 aaKnown RBP21.3■■□□□ 1
TRAPPC12-220ENST00000482645 SIK3Q9Y2K2 1263 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 CDY1Q9Y6F8 540 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 EYSQ5T1H1 3165 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 ITIH6Q6UXX5 1313 aa21.3■■□□□ 1
TRAPPC12-220ENST00000482645 CNPP09543 421 aaKnown RBP21.29■■□□□ 1
TRAPPC12-220ENST00000482645 CDR1P51861 262 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 GJB7Q6PEY0 223 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 RSPO2Q6UXX9 243 aaPredicted RBP21.29■■□□□ 1
TRAPPC12-220ENST00000482645 OSTM1Q86WC4 334 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.29■■□□□ 1
TRAPPC12-220ENST00000482645 MTRRQ9UBK8 725 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 FBXL5Q9UKA1 691 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 MTCH2Q9Y6C9 303 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 TEX28O15482 410 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 LILRB3O75022 631 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 OAZ2O95190 189 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 PDGFRBP09619 1106 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 KLRC2P26717 231 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 OR1D2P34982 312 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 CREMQ03060 361 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 CUL2Q13617 745 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 MRPL58Q14197 206 aaKnown RBP21.29■■□□□ 1
TRAPPC12-220ENST00000482645 PHLDB3Q6NSJ2 640 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 KAT5Q92993 513 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 CLSTN3Q9BQT9 956 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 BCO2Q9BYV7 579 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 NSUN3Q9H649 340 aaKnown RBP21.29■■□□□ 1
TRAPPC12-220ENST00000482645 UBE2TQ9NPD8 197 aaPredicted RBP21.29■■□□□ 1
TRAPPC12-220ENST00000482645 IRAK3Q9Y616 596 aa21.29■■□□□ 1
TRAPPC12-220ENST00000482645 REV3LO60673 3130 aa21.28■■□□□ 1
TRAPPC12-220ENST00000482645 A8MXQ7 604 aa21.28■■□□□ 1
TRAPPC12-220ENST00000482645 ADAM12O43184 909 aa21.28■■□□□ 1
TRAPPC12-220ENST00000482645 TACC1O75410 805 aa21.28■■□□□ 1
TRAPPC12-220ENST00000482645 OR4Q2P0C623 313 aa21.28■■□□□ 1
TRAPPC12-220ENST00000482645 CPB1P15086 417 aa21.28■■□□□ 1
TRAPPC12-220ENST00000482645 FOSL2P15408 326 aa21.28■■□□□ 1
TRAPPC12-220ENST00000482645 TRIM21P19474 475 aaKnown RBP21.28■■□□□ 1
TRAPPC12-220ENST00000482645 WARSP23381 471 aaKnown RBP21.28■■□□□ 1
TRAPPC12-220ENST00000482645 LMO2P25791 158 aa21.28■■□□□ 1
TRAPPC12-220ENST00000482645 GNL1P36915 607 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms