RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 PDCL2Q8N4E4 241 aa17.82■□□□□ 0.44
VAMP4-204ENST00000482519 LRRC52Q8N7C0 313 aa17.82■□□□□ 0.44
VAMP4-204ENST00000482519 CXorf38Q8TB03 319 aa17.82■□□□□ 0.44
VAMP4-204ENST00000482519 ASIC4Q96FT7 647 aa17.82■□□□□ 0.44
VAMP4-204ENST00000482519 HPDLQ96IR7 371 aa17.82■□□□□ 0.44
VAMP4-204ENST00000482519 SEPT5Q99719 369 aaPredicted RBP17.82■□□□□ 0.44
VAMP4-204ENST00000482519 RTP3Q9BQQ7 232 aa17.82■□□□□ 0.44
VAMP4-204ENST00000482519 ZCWPW1Q9H0M4 648 aa17.82■□□□□ 0.44
VAMP4-204ENST00000482519 CRISPLD1Q9H336 500 aa17.82■□□□□ 0.44
VAMP4-204ENST00000482519 CEP72Q9P209 647 aa17.82■□□□□ 0.44
VAMP4-204ENST00000482519 FBXL21Q9UKT6 434 aa17.82■□□□□ 0.44
VAMP4-204ENST00000482519 YIPF1Q9Y548 306 aa17.82■□□□□ 0.44
VAMP4-204ENST00000482519 ZFP37Q9Y6Q3 630 aaPredicted RBP17.82■□□□□ 0.44
VAMP4-204ENST00000482519 NOTCH4Q99466 2003 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 MTMR11A4FU01 709 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 NARSO43776 548 aaKnown RBP17.81■□□□□ 0.44
VAMP4-204ENST00000482519 SOAT2O75908 522 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 MYL4P12829 197 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 ALDH1A3P47895 512 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 EPHB3P54753 998 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 PSMD6Q15008 389 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 CENPPQ6IPU0 288 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 PARM1Q6UWI2 310 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 PDZD4Q76G19 769 aaPredicted RBP17.81■□□□□ 0.44
VAMP4-204ENST00000482519 SUGP1Q8IWZ8 645 aaKnown RBP17.81■□□□□ 0.44
VAMP4-204ENST00000482519 C12orf56Q8IXR9 622 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 HS6ST3Q8IZP7 471 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 SLC44A3Q8N4M1 653 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 TTC9BQ8N6N2 239 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 MCRS1Q96EZ8 462 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 CGRRF1Q99675 332 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 L1RE1Q9UN81 338 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 NUMBLQ9Y6R0 609 aa17.81■□□□□ 0.44
VAMP4-204ENST00000482519 PRPF40AO75400 957 aaKnown RBP17.8■□□□□ 0.44
VAMP4-204ENST00000482519 RHOBTB3O94955 611 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 CLSTN1O94985 981 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 PDGFBP01127 241 aaPredicted RBP17.8■□□□□ 0.44
VAMP4-204ENST00000482519 NR3C1P04150 777 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 CFHP08603 1231 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 CEBPBP17676 345 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 CASP4P49662 377 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 PLD1Q13393 1074 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 PNOCQ13519 176 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 HTR4Q13639 388 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 MGAT5BQ3V5L5 792 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 TRAPPC11Q7Z392 1133 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 LRRTM3Q86VH5 581 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 NPAS3Q8IXF0 933 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 FMR1NBQ8N0W7 255 aaPredicted RBP17.8■□□□□ 0.44
VAMP4-204ENST00000482519 FBXL6Q8N531 539 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 FAM200AQ8TCP9 573 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 TCEAL4Q96EI5 215 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 KCTD10Q9H3F6 313 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 ASAH2Q9NR71 780 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 DDX43Q9NXZ2 648 aaKnown RBP17.8■□□□□ 0.44
VAMP4-204ENST00000482519 DUSP12Q9UNI6 340 aa17.8■□□□□ 0.44
VAMP4-204ENST00000482519 ANHXE9PGG2 379 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 PDXKO00764 312 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 ZNF197O14709 1029 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 CALUO43852 315 aaPredicted RBP17.79■□□□□ 0.44
VAMP4-204ENST00000482519 PHACTR2O75167 634 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 KIF20AO95235 890 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 ACAT1P24752 427 aaKnown RBP17.79■□□□□ 0.44
VAMP4-204ENST00000482519 MYL7Q01449 175 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 TSPY1Q01534 308 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 TRPC3Q13507 836 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 CEP135Q66GS9 1140 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 BMP8AQ7Z5Y6 402 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 DCP1BQ8IZD4 617 aaKnown RBP17.79■□□□□ 0.44
VAMP4-204ENST00000482519 ADGRF2Q8IZF7 708 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 TMEM86AQ8N2M4 240 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 FGF14Q92915 247 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 NXPE3Q969Y0 559 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 MMS19Q96T76 1030 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 RPP25Q9BUL9 199 aaKnown RBP17.79■□□□□ 0.44
VAMP4-204ENST00000482519 MFSD1Q9H3U5 465 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 GDAP2Q9NXN4 497 aa17.79■□□□□ 0.44
VAMP4-204ENST00000482519 ABI2Q9NYB9 513 aaPredicted RBP17.79■□□□□ 0.44
VAMP4-204ENST00000482519 CST3P01034 146 aaPredicted RBP17.78■□□□□ 0.44
VAMP4-204ENST00000482519 GJA1P17302 382 aa17.78■□□□□ 0.44
VAMP4-204ENST00000482519 CCR2P41597 374 aa17.78■□□□□ 0.44
VAMP4-204ENST00000482519 FAM160A1Q05DH4 1040 aa17.78■□□□□ 0.44
VAMP4-204ENST00000482519 BIRC3Q13489 604 aa17.78■□□□□ 0.44
VAMP4-204ENST00000482519 SOWAHAQ2M3V2 549 aa17.78■□□□□ 0.44
VAMP4-204ENST00000482519 PRSS36Q5K4E3 855 aa17.78■□□□□ 0.44
VAMP4-204ENST00000482519 MTSS1LQ765P7 747 aa17.78■□□□□ 0.44
VAMP4-204ENST00000482519 TOP6BLQ8N6T0 577 aa17.78■□□□□ 0.44
VAMP4-204ENST00000482519 ZNF516Q92618 1163 aa17.78■□□□□ 0.44
VAMP4-204ENST00000482519 KXD1Q9BQD3 176 aa17.78■□□□□ 0.44
VAMP4-204ENST00000482519 AVENQ9NQS1 362 aaPredicted RBP17.78■□□□□ 0.44
VAMP4-204ENST00000482519 FRMD4BQ9Y2L6 1034 aa17.78■□□□□ 0.44
VAMP4-204ENST00000482519 HCRTO43612 131 aa17.77■□□□□ 0.44
VAMP4-204ENST00000482519 TUFMP49411 452 aaKnown RBP17.77■□□□□ 0.44
VAMP4-204ENST00000482519 SNW1Q13573 536 aaKnown RBP17.77■□□□□ 0.44
VAMP4-204ENST00000482519 KCNB1Q14721 858 aa17.77■□□□□ 0.44
VAMP4-204ENST00000482519 TAF12Q16514 161 aa17.77■□□□□ 0.44
VAMP4-204ENST00000482519 OSTM1Q86WC4 334 aa17.77■□□□□ 0.44
VAMP4-204ENST00000482519 SMYD4Q8IYR2 804 aaPredicted RBP17.77■□□□□ 0.44
VAMP4-204ENST00000482519 SIX5Q8N196 739 aa17.77■□□□□ 0.44
VAMP4-204ENST00000482519 ERCC4Q92889 916 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms