RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 MAGEF1Q9HAY2 307 aa10.5□□□□□ -0.73
TMEM39A-207ENST00000482162 ZFP14Q9HCL3 533 aa10.5□□□□□ -0.73
TMEM39A-207ENST00000482162 FAM86C1Q9NVL1 165 aa10.5□□□□□ -0.73
TMEM39A-207ENST00000482162 GDAP2Q9NXN4 497 aa10.5□□□□□ -0.73
TMEM39A-207ENST00000482162 SIX4Q9UIU6 781 aa10.5□□□□□ -0.73
TMEM39A-207ENST00000482162 PCDHA7Q9UN72 937 aa10.5□□□□□ -0.73
TMEM39A-207ENST00000482162 SLC27A5Q9Y2P5 690 aa10.5□□□□□ -0.73
TMEM39A-207ENST00000482162 MYH15Q9Y2K3 1946 aa10.5□□□□□ -0.73
TMEM39A-207ENST00000482162 GVINP1Q7Z2Y8 2422 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 KANSL1LA0AUZ9 987 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 ARNTLO00327 626 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 GABRDO14764 452 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 EIF3DO15371 548 aaKnown RBP eCLIP10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 F13A1P00488 732 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 PNPLA4P41247 253 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 TUFMP49411 452 aaKnown RBP10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 EPHB3P54753 998 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 SNRPFP62306 86 aaKnown RBP10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 AMPD3Q01432 767 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 SNW1Q13573 536 aaKnown RBP10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 ANGPT1Q15389 498 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 BMT2Q1RMZ1 405 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 RESP18Q5W5W9 173 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 ARMCX5Q6P1M9 558 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 MAMSTRQ6ZN01 415 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 GAREM2Q75VX8 874 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 MAML2Q8IZL2 1156 aaPredicted RBP10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 ELMOD1Q8N336 334 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 TTC9BQ8N6N2 239 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 C2orf15Q8WU43 125 aaKnown RBP10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 TMEM174Q8WUU8 243 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 DNASE1L2Q92874 299 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 HPS3Q969F9 1004 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 SAAL1Q96ER3 474 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 PGLYRP2Q96PD5 576 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 IL21Q9HBE4 155 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 ASAH2Q9NR71 780 aa10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 RBAKQ9NYW8 714 aaPredicted RBP10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 EP300Q09472 2414 aaPredicted RBP10.49□□□□□ -0.73
TMEM39A-207ENST00000482162 PVALEFA0A1B0GWK0 134 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 POLR2DO15514 142 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 MYL4P12829 197 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 PSMC3P17980 439 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 ATF6P18850 670 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 ALDH1A3P47895 512 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 TFAMQ00059 246 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 FCHO2Q0JRZ9 810 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 TEAD2Q15562 447 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 SV2CQ496J9 727 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 VITQ6UXI7 678 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 STXBP4Q6ZWJ1 553 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 UNC13DQ70J99 1090 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 ASCL5Q7RTU5 278 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 METTL23Q86XA0 190 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 HSCBQ8IWL3 235 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 C12orf56Q8IXR9 622 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 SYCP3Q8IZU3 236 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 THEM5Q8N1Q8 247 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 GPD1LQ8N335 351 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 PDCL2Q8N4E4 241 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 CACTINQ8WUQ7 758 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 DEPDC1BQ8WUY9 529 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 LEO1Q8WVC0 666 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 SCFD1Q8WVM8 642 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 NELL1Q92832 810 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 E2F7Q96AV8 911 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 DHX58Q96C10 678 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 RSPRY1Q96DX4 576 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 LRRC3BQ96PB8 259 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 ACBD6Q9BR61 282 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 PYM1Q9BRP8 204 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 TRMT61BQ9BVS5 477 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 FOXQ1Q9C009 403 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 GZF1Q9H116 711 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 KIAA1586Q9HCI6 787 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 PDE11AQ9HCR9 933 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 ZNF334Q9HCZ1 680 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 INTS13Q9NVM9 706 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 ITGA11Q9UKX5 1188 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 CFAP45Q9UL16 551 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 AGAP1Q9UPQ3 857 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 ZDHHC9Q9Y397 364 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 MTF2Q9Y483 593 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 NCANO14594 1321 aa10.48□□□□□ -0.73
TMEM39A-207ENST00000482162 GPR179Q6PRD1 2367 aa10.47□□□□□ -0.73
TMEM39A-207ENST00000482162 FAM237AA0A1B0GTK4 181 aa10.47□□□□□ -0.73
TMEM39A-207ENST00000482162 GOLGA8IPA6NC78 632 aa10.47□□□□□ -0.73
TMEM39A-207ENST00000482162 ZNF233A6NK53 670 aa10.47□□□□□ -0.73
TMEM39A-207ENST00000482162 GOLGA8JA6NMD2 632 aa10.47□□□□□ -0.73
TMEM39A-207ENST00000482162 FAM170BA6NMN3 283 aa10.47□□□□□ -0.73
TMEM39A-207ENST00000482162 SOBPA7XYQ1 873 aa10.47□□□□□ -0.73
TMEM39A-207ENST00000482162 GFRA3O60609 400 aa10.47□□□□□ -0.73
TMEM39A-207ENST00000482162 FGF19O95750 216 aa10.47□□□□□ -0.73
TMEM39A-207ENST00000482162 ITGB3P05106 788 aa10.47□□□□□ -0.73
TMEM39A-207ENST00000482162 DCNP07585 359 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-207ENST00000482162 HAPLN1P10915 354 aaPredicted RBP10.47□□□□□ -0.73
TMEM39A-207ENST00000482162 HMGA1P17096 107 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-207ENST00000482162 GJA1P17302 382 aa10.47□□□□□ -0.73
TMEM39A-207ENST00000482162 POLR2BP30876 1174 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-207ENST00000482162 VIPR2P41587 438 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms