RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 DGKEP52429 567 aa16.3■□□□□ 0.2
HDAC6-224ENST00000481929 DMC1Q14565 340 aa16.3■□□□□ 0.2
HDAC6-224ENST00000481929 CENPPQ6IPU0 288 aa16.3■□□□□ 0.2
HDAC6-224ENST00000481929 RPLP0P6Q8NHW5 317 aa16.3■□□□□ 0.2
HDAC6-224ENST00000481929 FAM83CQ9BQN1 747 aa16.3■□□□□ 0.2
HDAC6-224ENST00000481929 POLR3CQ9BUI4 534 aaPredicted RBP16.3■□□□□ 0.2
HDAC6-224ENST00000481929 MRPL4Q9BYD3 311 aaKnown RBP16.3■□□□□ 0.2
HDAC6-224ENST00000481929 SMG9Q9H0W8 520 aaKnown RBP16.3■□□□□ 0.2
HDAC6-224ENST00000481929 EBF3Q9H4W6 596 aa16.3■□□□□ 0.2
HDAC6-224ENST00000481929 ASCC3Q8N3C0 2202 aaKnown RBP16.3■□□□□ 0.2
HDAC6-224ENST00000481929 CITO14578 2027 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 MTMR11A4FU01 709 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 PATE3B3GLJ2 98 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 M0QZQ0 153 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 VEPH1Q14D04 833 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 USP39Q53GS9 565 aaKnown RBP16.29■□□□□ 0.2
HDAC6-224ENST00000481929 TRIM68Q6AZZ1 485 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 ABCA7Q8IZY2 2146 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 ATAD1Q8NBU5 361 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 CHFRQ96EP1 664 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 MTMR9Q96QG7 549 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 TCHPQ9BT92 498 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 ZSWIM6Q9HCJ5 1215 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 POLD4Q9HCU8 107 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 PTPRHQ9HD43 1115 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 TUBGCP4Q9UGJ1 667 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 INVSQ9Y283 1065 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 WDFY3Q8IZQ1 3526 aa16.29■□□□□ 0.2
HDAC6-224ENST00000481929 OTOL1A6NHN0 477 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-224ENST00000481929 SOAT2O75908 522 aa16.28■□□□□ 0.2
HDAC6-224ENST00000481929 HARSP12081 509 aaKnown RBP16.28■□□□□ 0.2
HDAC6-224ENST00000481929 IRX4P78413 519 aa16.28■□□□□ 0.2
HDAC6-224ENST00000481929 LMAN2Q12907 356 aa16.28■□□□□ 0.2
HDAC6-224ENST00000481929 MYBPC2Q14324 1141 aa16.28■□□□□ 0.2
HDAC6-224ENST00000481929 CMTM8Q8IZV2 173 aa16.28■□□□□ 0.2
HDAC6-224ENST00000481929 TTC9BQ8N6N2 239 aa16.28■□□□□ 0.2
HDAC6-224ENST00000481929 TSTD1Q8NFU3 115 aa16.28■□□□□ 0.2
HDAC6-224ENST00000481929 ERMNQ8TAM6 284 aa16.28■□□□□ 0.2
HDAC6-224ENST00000481929 TNFRSF25Q93038 417 aa16.28■□□□□ 0.2
HDAC6-224ENST00000481929 P2RY13Q9BPV8 354 aa16.28■□□□□ 0.2
HDAC6-224ENST00000481929 TARS2Q9BW92 718 aaKnown RBP16.28■□□□□ 0.2
HDAC6-224ENST00000481929 FBRSL1Q9HCM7 1045 aaKnown RBP16.28■□□□□ 0.2
HDAC6-224ENST00000481929 ZMYM5Q9UJ78 669 aa16.28■□□□□ 0.2
HDAC6-224ENST00000481929 CYP46A1Q9Y6A2 500 aa16.28■□□□□ 0.2
HDAC6-224ENST00000481929 CCDC169A6NNP5 214 aa16.27■□□□□ 0.2
HDAC6-224ENST00000481929 MEFVO15553 781 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-224ENST00000481929 AVPR1AP37288 418 aa16.27■□□□□ 0.2
HDAC6-224ENST00000481929 DHPSP49366 369 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-224ENST00000481929 GALK1P51570 392 aa16.27■□□□□ 0.2
HDAC6-224ENST00000481929 SIM1P81133 766 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-224ENST00000481929 SCRN1Q12765 414 aa16.27■□□□□ 0.2
HDAC6-224ENST00000481929 BFSP1Q12934 665 aa16.27■□□□□ 0.2
HDAC6-224ENST00000481929 PSMD2Q13200 908 aa16.27■□□□□ 0.2
HDAC6-224ENST00000481929 SOWAHCQ53LP3 525 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-224ENST00000481929 ARMCX5Q6P1M9 558 aa16.27■□□□□ 0.2
HDAC6-224ENST00000481929 MPZL3Q6UWV2 235 aa16.27■□□□□ 0.2
HDAC6-224ENST00000481929 DSTYKQ6XUX3 929 aa16.27■□□□□ 0.2
HDAC6-224ENST00000481929 PROSER1Q86XN7 944 aa16.27■□□□□ 0.2
HDAC6-224ENST00000481929 WASF1Q92558 559 aa16.27■□□□□ 0.2
HDAC6-224ENST00000481929 PIGKQ92643 395 aa16.27■□□□□ 0.2
HDAC6-224ENST00000481929 LPIN3Q9BQK8 851 aa16.27■□□□□ 0.2
HDAC6-224ENST00000481929 SLC46A2Q9BY10 475 aa16.27■□□□□ 0.2
HDAC6-224ENST00000481929 TPSD1Q9BZJ3 242 aa16.27■□□□□ 0.2
HDAC6-224ENST00000481929 HSFX1Q9UBD0 423 aa16.27■□□□□ 0.2
HDAC6-224ENST00000481929 EVLQ9UI08 416 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-224ENST00000481929 IGSF10Q6WRI0 2623 aa16.27■□□□□ 0.19
HDAC6-224ENST00000481929 PCNX2A6NKB5 2137 aa16.27■□□□□ 0.19
HDAC6-224ENST00000481929 THADAQ6YHU6 1953 aa16.26■□□□□ 0.19
HDAC6-224ENST00000481929 SPAARA0A1B0GVQ0 90 aa16.26■□□□□ 0.19
HDAC6-224ENST00000481929 WNT7AO00755 349 aa16.26■□□□□ 0.19
HDAC6-224ENST00000481929 ARSAP15289 507 aa16.26■□□□□ 0.19
HDAC6-224ENST00000481929 PROZP22891 400 aa16.26■□□□□ 0.19
HDAC6-224ENST00000481929 U2AF2P26368 475 aaKnown RBP eCLIP16.26■□□□□ 0.19
HDAC6-224ENST00000481929 RPA1P27694 616 aa16.26■□□□□ 0.19
HDAC6-224ENST00000481929 RDXP35241 583 aaKnown RBP16.26■□□□□ 0.19
HDAC6-224ENST00000481929 TAF12Q16514 161 aa16.26■□□□□ 0.19
HDAC6-224ENST00000481929 OVOS1Q6IE37 1185 aa16.26■□□□□ 0.19
HDAC6-224ENST00000481929 CC2D1AQ6P1N0 951 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-224ENST00000481929 SEPT5Q99719 369 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-224ENST00000481929 NUSAP1Q9BXS6 441 aaKnown RBP16.26■□□□□ 0.19
HDAC6-224ENST00000481929 TMEM60Q9H2L4 133 aa16.26■□□□□ 0.19
HDAC6-224ENST00000481929 TMEM134Q9H6X4 195 aa16.26■□□□□ 0.19
HDAC6-224ENST00000481929 KIF9Q9HAQ2 790 aa16.26■□□□□ 0.19
HDAC6-224ENST00000481929 IL21Q9HBE4 155 aa16.26■□□□□ 0.19
HDAC6-224ENST00000481929 CCL26Q9Y258 94 aa16.26■□□□□ 0.19
HDAC6-224ENST00000481929 ADAMTS20P59510 1910 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 H0Y626 953 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 ABLIM1O14639 778 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 TRIM16O95361 564 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 LARGE1O95461 756 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 BCKDHBP21953 392 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 LRPAP1P30533 357 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 GJA4P35212 333 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 MAPK8P45983 427 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 NPTX2P47972 431 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 TUFMP49411 452 aaKnown RBP16.25■□□□□ 0.19
HDAC6-224ENST00000481929 AARSP49588 968 aaKnown RBP eCLIP16.25■□□□□ 0.19
HDAC6-224ENST00000481929 PEX3P56589 373 aa16.25■□□□□ 0.19
HDAC6-224ENST00000481929 IRX6P78412 446 aaPredicted RBP16.25■□□□□ 0.19
HDAC6-224ENST00000481929 PDGFRLQ15198 375 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms