RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 ZNF277Q9NRM2 450 aaPredicted RBP3.38□□□□□ -1.87
KDM1A-204ENST00000481879 SAP30BPQ9UHR5 308 aaKnown RBP3.38□□□□□ -1.87
KDM1A-204ENST00000481879 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.38□□□□□ -1.87
KDM1A-204ENST00000481879 PPEF2O14830 753 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 JTBO76095 146 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 PRKD3O94806 890 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 NTN1O95631 604 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 ANXA1P04083 346 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 CNGA1P29973 690 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 FOXG1P55316 489 aaPredicted RBP3.37□□□□□ -1.87
KDM1A-204ENST00000481879 ZNF280AP59817 542 aaPredicted RBP3.37□□□□□ -1.87
KDM1A-204ENST00000481879 BMPR2Q13873 1038 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 CT47A1Q5JQC4 288 aaPredicted RBP3.37□□□□□ -1.87
KDM1A-204ENST00000481879 CRELD2Q6UXH1 353 aaPredicted RBP3.37□□□□□ -1.87
KDM1A-204ENST00000481879 SLC30A10Q6XR72 485 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 ZNF517Q6ZMY9 492 aaPredicted RBP3.37□□□□□ -1.87
KDM1A-204ENST00000481879 ZNF66Q6ZN08 573 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 MIGA2Q7L4E1 593 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 ZNF551Q7Z340 670 aaPredicted RBP3.37□□□□□ -1.87
KDM1A-204ENST00000481879 AFAP1L2Q8N4X5 818 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 FBXO41Q8TF61 875 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 FKBP10Q96AY3 582 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 RGMAQ96B86 450 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 OSBPL9Q96SU4 736 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 SH3BP4Q9P0V3 963 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 DKK3Q9UBP4 350 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 PCDHB1Q9Y5F3 818 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 PCDHA13Q9Y5I0 950 aa3.37□□□□□ -1.87
KDM1A-204ENST00000481879 POLRMTO00411 1230 aaKnown RBP3.36□□□□□ -1.87
KDM1A-204ENST00000481879 VIL1P09327 827 aaKnown RBP3.36□□□□□ -1.87
KDM1A-204ENST00000481879 CBSLP0DN79 551 aa3.36□□□□□ -1.87
KDM1A-204ENST00000481879 CPEP16870 476 aa3.36□□□□□ -1.87
KDM1A-204ENST00000481879 NDUFB7P17568 137 aa3.36□□□□□ -1.87
KDM1A-204ENST00000481879 CBSP35520 551 aa3.36□□□□□ -1.87
KDM1A-204ENST00000481879 NDUFV1P49821 464 aa3.36□□□□□ -1.87
KDM1A-204ENST00000481879 TBCCQ15814 346 aa3.36□□□□□ -1.87
KDM1A-204ENST00000481879 SUPT20HL1Q3ZLR7 823 aa3.36□□□□□ -1.87
KDM1A-204ENST00000481879 KLHL22Q53GT1 634 aa3.36□□□□□ -1.87
KDM1A-204ENST00000481879 CEP78Q5JTW2 689 aa3.36□□□□□ -1.87
KDM1A-204ENST00000481879 AWAT2Q6E213 333 aa3.36□□□□□ -1.87
KDM1A-204ENST00000481879 LHFPL2Q6ZUX7 228 aa3.36□□□□□ -1.87
KDM1A-204ENST00000481879 SH2D3AQ9BRG2 576 aa3.36□□□□□ -1.87
KDM1A-204ENST00000481879 ACTRT3Q9BYD9 372 aa3.36□□□□□ -1.87
KDM1A-204ENST00000481879 ANLNQ9NQW6 1124 aa3.36□□□□□ -1.87
KDM1A-204ENST00000481879 ARHGEF3Q9NR81 526 aa3.36□□□□□ -1.87
KDM1A-204ENST00000481879 WASHC2AQ641Q2 1341 aa3.36□□□□□ -1.87
KDM1A-204ENST00000481879 TISP43B9A030 160 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 PRRT4C9JH25 899 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 E9PLN8 166 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 SGTAO43765 313 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 CLSTN1O94985 981 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 EYA4O95677 639 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 TUBB4AP04350 444 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 NHLRC4P0CG21 123 aaPredicted RBP3.35□□□□□ -1.87
KDM1A-204ENST00000481879 JUPP14923 745 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 LPOP22079 712 aaPredicted RBP3.35□□□□□ -1.87
KDM1A-204ENST00000481879 CCKBRP32239 447 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 RAB39AQ14964 217 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 PRAMEF17Q5VTA0 474 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 GADL1Q6ZQY3 521 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 SLC29A4Q7RTT9 530 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 TECPR1Q7Z6L1 1165 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 AMOTL1Q8IY63 956 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 FANCBQ8NB91 859 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 COG1Q8WTW3 980 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 SSH1Q8WYL5 1049 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 TBC1D5Q92609 795 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 HDAC10Q969S8 669 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 REPS1Q96D71 796 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 VKORC1Q9BQB6 163 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 ELOVL5Q9NYP7 299 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 CALCOCO1Q9P1Z2 691 aa3.35□□□□□ -1.87
KDM1A-204ENST00000481879 SMIM22K7EJ46 135 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 GPR39O43194 453 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 SOAT2O75908 522 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 NXPH3O95157 252 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 TOP3BO95985 862 aaKnown RBP3.34□□□□□ -1.87
KDM1A-204ENST00000481879 TKTP29401 623 aaKnown RBP3.34□□□□□ -1.87
KDM1A-204ENST00000481879 NR4A2P43354 598 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 MMP13P45452 471 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 ALDH9A1P49189 494 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 POLGP54098 1239 aaPredicted RBP3.34□□□□□ -1.87
KDM1A-204ENST00000481879 ERVK-21P61565 698 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 LAMB3Q13751 1172 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 CLUL1Q15846 466 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 SLC2A7Q6PXP3 512 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 PDSS2Q86YH6 399 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 WDR66Q8TBY9 1149 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 ATRIPQ8WXE1 791 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 SCAMP4Q969E2 229 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 HMCESQ96FZ2 354 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 CLPTM1LQ96KA5 538 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 MRGPRX4Q96LA9 322 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 TMEM79Q9BSE2 394 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 SPRTNQ9H040 489 aaPredicted RBP3.34□□□□□ -1.87
KDM1A-204ENST00000481879 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.34□□□□□ -1.87
KDM1A-204ENST00000481879 PRKAB1Q9Y478 270 aa3.34□□□□□ -1.87
KDM1A-204ENST00000481879 TRIM75PA6NK02 468 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 K7ESF4 209 aa3.33□□□□□ -1.88
KDM1A-204ENST00000481879 MYO1FO00160 1098 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms