RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 C20orf96Q9NUD7 363 aaPredicted RBP12.08□□□□□ -0.48
TRIM27-205ENST00000481474 PKD2L2Q9NZM6 624 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 ZNF624Q9P2J8 865 aaPredicted RBP12.08□□□□□ -0.48
TRIM27-205ENST00000481474 SH3GLB1Q9Y371 365 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 KIAA1107Q9UPP5 1409 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 CASTOR2A6NHX0 329 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 PLCG1P19174 1290 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 TUBB4BP68371 445 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 HPS6Q86YV9 775 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 FAM9CQ8IZT9 166 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 ST13P5Q8NFI4 369 aaPredicted RBP12.08□□□□□ -0.48
TRIM27-205ENST00000481474 OR2W6PQ8NHA6 318 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 WDR36Q8NI36 951 aaKnown RBP12.08□□□□□ -0.48
TRIM27-205ENST00000481474 PMS2P54278 862 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 RIN1Q13671 783 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 USP10Q14694 798 aaKnown RBP12.08□□□□□ -0.48
TRIM27-205ENST00000481474 NAA30Q147X3 362 aaPredicted RBP12.08□□□□□ -0.48
TRIM27-205ENST00000481474 ERMARDQ5T6L9 678 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 RNF31Q96EP0 1072 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 PRPF18Q99633 342 aaKnown RBP12.08□□□□□ -0.48
TRIM27-205ENST00000481474 SLC35C2Q9NQQ7 365 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 UBAP1Q9NZ09 502 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 CTNNAL1Q9UBT7 734 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 TRBV23OR9-2A0A075B6M9 112 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 LDHAP00338 332 aaKnown RBP12.08□□□□□ -0.48
TRIM27-205ENST00000481474 NDUFA8P51970 172 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 WDR72Q3MJ13 1102 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 RAD21L1Q9H4I0 556 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.08□□□□□ -0.48
TRIM27-205ENST00000481474 NEURL1BA8MQ27 555 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 GOLGA8KD6RF30 607 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 TBC1D4O60343 1298 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 TRIM13O60858 407 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 PRKAG1P54619 331 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 GFPT1Q06210 699 aaPredicted RBP12.07□□□□□ -0.48
TRIM27-205ENST00000481474 TRIM25Q14258 630 aaKnown RBP12.07□□□□□ -0.48
TRIM27-205ENST00000481474 SETD6Q8TBK2 473 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 TLR8Q9NR97 1041 aaKnown RBP12.07□□□□□ -0.48
TRIM27-205ENST00000481474 PDIA2Q13087 525 aaKnown RBP12.07□□□□□ -0.48
TRIM27-205ENST00000481474 BTG3Q14201 252 aaPredicted RBP12.07□□□□□ -0.48
TRIM27-205ENST00000481474 ZCCHC8Q6NZY4 707 aaKnown RBP12.07□□□□□ -0.48
TRIM27-205ENST00000481474 SAMD7Q7Z3H4 446 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 STX12Q86Y82 276 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 EPHX4Q8IUS5 362 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 SMPDL3BQ92485 455 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 TNKS2Q9H2K2 1166 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 IMPAD1Q9NX62 359 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 LNPEPQ9UIQ6 1025 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 PPP2R3BQ9Y5P8 575 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 USP19O94966 1318 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 MAPK13O15264 365 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 MSX1P28360 303 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 TRIM65Q6PJ69 517 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 PADI6Q6TGC4 694 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 EPM2AIP1Q7L775 607 aaPredicted RBP12.07□□□□□ -0.48
TRIM27-205ENST00000481474 FAR1Q8WVX9 515 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 KLHL31Q9H511 634 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 TASP1Q9H6P5 420 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 DNAJC5BQ9UF47 199 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 CUX1P39880 1505 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 SMNDC1O75940 238 aaKnown RBP eCLIP12.07□□□□□ -0.481e-12■■■■■ 29.6
TRIM27-205ENST00000481474 PTPN20Q4JDL3 420 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 SLC30A5Q8TAD4 765 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 MARK1Q9P0L2 795 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 USP18Q9UMW8 372 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 H7C1W4 665 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 BBOX1O75936 387 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 IL10P22301 178 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 S100A5P33763 92 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 RGS2P41220 211 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 RBL2Q08999 1139 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 XRCC4Q13426 336 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 SMTNL2Q2TAL5 461 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 SLC35F6Q8N357 371 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 PHACTR1Q9C0D0 580 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 PPP2R2CQ9Y2T4 447 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 EPN1Q9Y6I3 576 aaPredicted RBP12.07□□□□□ -0.48
TRIM27-205ENST00000481474 TRIM43BA6NCK2 446 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 B3GAT3O94766 335 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 POMCP01189 267 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 ALAS2P22557 587 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 HNF4AP41235 474 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 ARL4CP56559 192 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 POU4F1Q01851 419 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 KDSRQ06136 332 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 CLEC16AQ2KHT3 1053 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 ZNF284Q2VY69 593 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 MCTP2Q6DN12 878 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 ST13P4Q8IZP2 240 aaPredicted RBP12.07□□□□□ -0.48
TRIM27-205ENST00000481474 AGGF1Q8N302 714 aaeCLIP12.07□□□□□ -0.48
TRIM27-205ENST00000481474 LCORLQ8N3X6 602 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 SLC44A5Q8NCS7 719 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 THUMPD3Q9BV44 507 aaKnown RBP12.07□□□□□ -0.48
TRIM27-205ENST00000481474 EVA1BQ9NVM1 165 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 VPS28Q9UK41 221 aa12.07□□□□□ -0.48
TRIM27-205ENST00000481474 FAM25AB3EWG3 89 aa12.06□□□□□ -0.48
TRIM27-205ENST00000481474 FAM25CB3EWG5 89 aa12.06□□□□□ -0.48
TRIM27-205ENST00000481474 FAM25GB3EWG6 89 aa12.06□□□□□ -0.48
TRIM27-205ENST00000481474 CLTBP09497 229 aa12.06□□□□□ -0.48
TRIM27-205ENST00000481474 ADSLP30566 484 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms