RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 MCATQ8IVS2 390 aaKnown RBP7.27□□□□□ -1.25
LRCH3-216ENST00000481048 SMRP1Q8NCR6 262 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 RDM1Q8NG50 284 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 PGBD1Q96JS3 809 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 MSLNLQ96KJ4 702 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 TCEANC2Q96MN5 208 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 RIT2Q99578 217 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 RNF26Q9BY78 433 aaPredicted RBP7.27□□□□□ -1.25
LRCH3-216ENST00000481048 ATP6V0A4Q9HBG4 840 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 TLR9Q9NR96 1032 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 GPATCH2Q9NW75 528 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 TMEM260Q9NX78 707 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 DUSP13Q9UII6 198 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 GINS2Q9Y248 185 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 NOC2LQ9Y3T9 749 aaKnown RBP7.27□□□□□ -1.25
LRCH3-216ENST00000481048 C5orf42Q9H799 3197 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 RIF1Q5UIP0 2472 aaKnown RBP7.26□□□□□ -1.25
LRCH3-216ENST00000481048 FAM86C2PA6NEL3 165 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 TBKBP1A7MCY6 615 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 DDX39AO00148 427 aaKnown RBP7.26□□□□□ -1.25
LRCH3-216ENST00000481048 MGEA5O60502 916 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 TBX10O75333 385 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 FGF18O76093 207 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 REC8O95072 547 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 SRGAP2BP0DMP2 458 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 IFNAR1P17181 557 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 LAG3P18627 525 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 DNAJB1P25685 340 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 JAK3P52333 1124 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 KRT17Q04695 432 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 EGR3Q06889 387 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 APOBRQ0VD83 1088 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 BMS1Q14692 1282 aaKnown RBP7.26□□□□□ -1.25
LRCH3-216ENST00000481048 CBX2Q14781 532 aaPredicted RBP7.26□□□□□ -1.25
LRCH3-216ENST00000481048 NTRK3Q16288 839 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 KIZQ2M2Z5 673 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 TMEM266Q2M3C6 531 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 TSNAXIP1Q2TAA8 658 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 PAN2Q504Q3 1202 aaKnown RBP7.26□□□□□ -1.25
LRCH3-216ENST00000481048 PRR16Q569H4 304 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 EFCAB12Q6NXP0 572 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 Q6ZUG5 572 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 METTL13Q8N6R0 699 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 PDZD8Q8NEN9 1154 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 RASGRP4Q8TDF6 673 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 MICAL1Q8TDZ2 1067 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 EDAQ92838 391 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 BRF1Q92994 677 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 ACSF2Q96CM8 615 aaPredicted RBP7.26□□□□□ -1.25
LRCH3-216ENST00000481048 ZBTB10Q96DT7 871 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 MAP7D2Q96T17 732 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 PRRX2Q99811 253 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 PHF7Q9BWX1 381 aaPredicted RBP7.26□□□□□ -1.25
LRCH3-216ENST00000481048 TMEM117Q9H0C3 514 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 TLE6Q9H808 572 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 NGRNQ9NPE2 291 aaKnown RBP7.26□□□□□ -1.25
LRCH3-216ENST00000481048 TYW1Q9NV66 732 aaKnown RBP7.26□□□□□ -1.25
LRCH3-216ENST00000481048 DACT1Q9NYF0 836 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 CLEC1BQ9P126 229 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 GABBR1Q9UBS5 961 aa7.26□□□□□ -1.25
LRCH3-216ENST00000481048 NAP1L2Q9ULW6 460 aaPredicted RBP7.26□□□□□ -1.25
LRCH3-216ENST00000481048 FAM186AA6NE01 2351 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 MTCL1Q9Y4B5 1905 aaKnown RBP7.25□□□□□ -1.25
LRCH3-216ENST00000481048 A0A0U1RQF3 1178 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 LOC730098B7Z3J9 87 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 HOXB8P17481 243 aaPredicted RBP7.25□□□□□ -1.25
LRCH3-216ENST00000481048 RPS6KB1P23443 525 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 GTF2F1P35269 517 aaKnown RBP eCLIP7.25□□□□□ -1.25
LRCH3-216ENST00000481048 PPM1AP35813 382 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 NRIP1P48552 1158 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 NLRP11P59045 1033 aaKnown RBP7.25□□□□□ -1.25
LRCH3-216ENST00000481048 RPL6Q02878 288 aaKnown RBP7.25□□□□□ -1.25
LRCH3-216ENST00000481048 KCNC3Q14003 757 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 FAM102BQ5T8I3 360 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 GALNT17Q6IS24 598 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 MOXD1Q6UVY6 613 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 ADGRD2Q7Z7M1 963 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 FAM228AQ86W67 206 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 THNSL1Q8IYQ7 743 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 LINC01465Q8N7H1 131 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 COLGALT1Q8NBJ5 622 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 MRPS27Q92552 414 aaKnown RBP7.25□□□□□ -1.25
LRCH3-216ENST00000481048 CCDC136Q96JN2 1154 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 UIMC1Q96RL1 719 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 TRAIPQ9BWF2 469 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 GPR62Q9BZJ7 368 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 INO80BQ9C086 356 aaPredicted RBP7.25□□□□□ -1.25
LRCH3-216ENST00000481048 CWH43Q9H720 699 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 SP110Q9HB58 689 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 CHST12Q9NRB3 414 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 ADAM30Q9UKF2 790 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 AKT3Q9Y243 479 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 SNX14Q9Y5W7 946 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 AK5Q9Y6K8 562 aa7.25□□□□□ -1.25
LRCH3-216ENST00000481048 CYP3A7-CYP3A51PA0A087WV96 503 aa7.24□□□□□ -1.25
LRCH3-216ENST00000481048 MSH4O15457 936 aa7.24□□□□□ -1.25
LRCH3-216ENST00000481048 LINC01565O15544 149 aa7.24□□□□□ -1.25
LRCH3-216ENST00000481048 GAS7O60861 476 aa7.24□□□□□ -1.25
LRCH3-216ENST00000481048 GLP2RO95838 553 aa7.24□□□□□ -1.25
LRCH3-216ENST00000481048 VTNP04004 478 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms