RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 TYRO3Q06418 890 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 PPP3CAQ08209 521 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 ADCY1Q08828 1119 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 ADAM9Q13443 819 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 SOWAHAQ2M3V2 549 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 CES5AQ6NT32 575 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 POTEHQ6S545 545 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 LIMS2Q7Z4I7 341 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 USP37Q86T82 979 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 FAM186BQ8IYM0 893 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 KBTBD7Q8WVZ9 684 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 SMG7Q92540 1137 aaKnown RBP13.15□□□□□ -0.3
PTPRF-213ENST00000481019 HPDLQ96IR7 371 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 ZNF560Q96MR9 790 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 DUSP9Q99956 384 aaKnown RBP13.15□□□□□ -0.3
PTPRF-213ENST00000481019 PRKD2Q9BZL6 878 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 XYLT2Q9H1B5 865 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 TMLHEQ9NVH6 421 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 GDAP2Q9NXN4 497 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 PRKAG3Q9UGI9 489 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 POLIQ9UNA4 740 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 FAM50BQ9Y247 325 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 SNX9Q9Y5X1 595 aa13.15□□□□□ -0.3
PTPRF-213ENST00000481019 OR6C75A6NL08 312 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 TNFRSF10AO00220 468 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 SOAT2O75908 522 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 KIF20AO95235 890 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 CPB1P15086 417 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 ATF2P15336 505 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 ACAT1P24752 427 aaKnown RBP13.14□□□□□ -0.31
PTPRF-213ENST00000481019 SSTR3P32745 418 aaPredicted RBP13.14□□□□□ -0.31
PTPRF-213ENST00000481019 PNPLA4P41247 253 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 MTHFRP42898 656 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 MRE11P49959 708 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 NLRP12P59046 1061 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 TPM4P67936 248 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 UVSSAQ2YD98 709 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 EDRF1Q3B7T1 1238 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 PPM1LQ5SGD2 360 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 ATAT1Q5SQI0 421 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 KLHL10Q6JEL2 608 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 C15orf39Q6ZRI6 1047 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 MLKLQ8NB16 471 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 ATAD1Q8NBU5 361 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 TMC2Q8TDI7 906 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 RIPOR3Q96MK2 946 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 MED15Q96RN5 788 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 LPIN3Q9BQK8 851 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 MRPL45Q9BRJ2 306 aaKnown RBP13.14□□□□□ -0.31
PTPRF-213ENST00000481019 ZCWPW1Q9H0M4 648 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 CYP4F11Q9HBI6 524 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.14□□□□□ -0.31
PTPRF-213ENST00000481019 ZDHHC7Q9NXF8 308 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 AFF4Q9UHB7 1163 aaKnown RBP13.14□□□□□ -0.31
PTPRF-213ENST00000481019 SLC27A5Q9Y2P5 690 aa13.14□□□□□ -0.31
PTPRF-213ENST00000481019 ARHGEF37A1IGU5 675 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 MTMR11A4FU01 709 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 ATP2C2O75185 946 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 PAX3P23760 479 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 CCNE1P24864 410 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 LMO2P25791 158 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 GCLMP48507 274 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 VAMP7P51809 220 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 STX17P56962 302 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 MCCD1P59942 119 aaPredicted RBP13.13□□□□□ -0.31
PTPRF-213ENST00000481019 DUSP4Q13115 394 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 GPR17Q13304 367 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 STIM1Q13586 685 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 SLC39A12Q504Y0 691 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 LIN9Q5TKA1 542 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 TTI2Q6NXR4 508 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 SV2AQ7L0J3 742 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 GRASPQ7Z6J2 395 aaPredicted RBP13.13□□□□□ -0.31
PTPRF-213ENST00000481019 TCEAL8Q8IYN2 117 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 ST13P5Q8NFI4 369 aaPredicted RBP13.13□□□□□ -0.31
PTPRF-213ENST00000481019 NELFBQ8WX92 580 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 MYADMQ96S97 322 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 PKMYT1Q99640 499 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 SDCBP2Q9H190 292 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 WDR6Q9NNW5 1121 aaKnown RBP13.13□□□□□ -0.31
PTPRF-213ENST00000481019 DNMT3BQ9UBC3 853 aaKnown RBP13.13□□□□□ -0.31
PTPRF-213ENST00000481019 CTNND2Q9UQB3 1225 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 FRMD4BQ9Y2L6 1034 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 INSL5Q9Y5Q6 135 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 CLUHO75153 1309 aa13.13□□□□□ -0.31
PTPRF-213ENST00000481019 SMTNL1A8MU46 457 aa13.12□□□□□ -0.31
PTPRF-213ENST00000481019 GABRDO14764 452 aa13.12□□□□□ -0.31
PTPRF-213ENST00000481019 MAPK13O15264 365 aa13.12□□□□□ -0.31
PTPRF-213ENST00000481019 HUS1O60921 280 aa13.12□□□□□ -0.31
PTPRF-213ENST00000481019 HNRNPA1P09651 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
PTPRF-213ENST00000481019 PSMC2P35998 433 aaKnown RBP13.12□□□□□ -0.31
PTPRF-213ENST00000481019 RAP1GAPP47736 663 aa13.12□□□□□ -0.31
PTPRF-213ENST00000481019 BIRC3Q13489 604 aa13.12□□□□□ -0.31
PTPRF-213ENST00000481019 NCOA4Q13772 614 aa13.12□□□□□ -0.31
PTPRF-213ENST00000481019 ZACNQ401N2 412 aa13.12□□□□□ -0.31
PTPRF-213ENST00000481019 TPGS2Q68CL5 300 aa13.12□□□□□ -0.31
PTPRF-213ENST00000481019 SPOPLQ6IQ16 392 aa13.12□□□□□ -0.31
PTPRF-213ENST00000481019 METTL23Q86XA0 190 aa13.12□□□□□ -0.31
PTPRF-213ENST00000481019 RNF135Q8IUD6 432 aa13.12□□□□□ -0.31
PTPRF-213ENST00000481019 ADGRF2Q8IZF7 708 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms