RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 PDCL2Q8N4E4 241 aa21.67■■□□□ 1.06
VPS36-204ENST00000480923 ATAD1Q8NBU5 361 aa21.67■■□□□ 1.06
VPS36-204ENST00000480923 ENGASEQ8NFI3 743 aa21.67■■□□□ 1.06
VPS36-204ENST00000480923 RSAD2Q8WXG1 361 aa21.67■■□□□ 1.06
VPS36-204ENST00000480923 HPDLQ96IR7 371 aa21.67■■□□□ 1.06
VPS36-204ENST00000480923 MFSD14AQ96MC6 490 aa21.67■■□□□ 1.06
VPS36-204ENST00000480923 ZNF512Q96ME7 567 aaPredicted RBP21.67■■□□□ 1.06
VPS36-204ENST00000480923 RTP3Q9BQQ7 232 aa21.67■■□□□ 1.06
VPS36-204ENST00000480923 ZCWPW1Q9H0M4 648 aa21.67■■□□□ 1.06
VPS36-204ENST00000480923 DMAC2Q9NW81 257 aa21.67■■□□□ 1.06
VPS36-204ENST00000480923 L1RE1Q9UN81 338 aa21.67■■□□□ 1.06
VPS36-204ENST00000480923 SLC27A5Q9Y2P5 690 aa21.67■■□□□ 1.06
VPS36-204ENST00000480923 ZFP37Q9Y6Q3 630 aaPredicted RBP21.67■■□□□ 1.06
VPS36-204ENST00000480923 NR3C1P04150 777 aa21.66■■□□□ 1.06
VPS36-204ENST00000480923 CDR1P51861 262 aa21.66■■□□□ 1.06
VPS36-204ENST00000480923 PLD1Q13393 1074 aa21.66■■□□□ 1.06
VPS36-204ENST00000480923 CENPPQ6IPU0 288 aa21.66■■□□□ 1.06
VPS36-204ENST00000480923 SLC9A9Q8IVB4 645 aa21.66■■□□□ 1.06
VPS36-204ENST00000480923 ING5Q8WYH8 240 aa21.66■■□□□ 1.06
VPS36-204ENST00000480923 FGF13Q92913 245 aa21.66■■□□□ 1.06
VPS36-204ENST00000480923 CRISPLD1Q9H336 500 aa21.66■■□□□ 1.06
VPS36-204ENST00000480923 GDAP2Q9NXN4 497 aa21.66■■□□□ 1.06
VPS36-204ENST00000480923 SCN1AP35498 2009 aa21.65■■□□□ 1.06
VPS36-204ENST00000480923 ALDH1A3P47895 512 aa21.65■■□□□ 1.06
VPS36-204ENST00000480923 CASP4P49662 377 aa21.65■■□□□ 1.06
VPS36-204ENST00000480923 TSPY1Q01534 308 aa21.65■■□□□ 1.06
VPS36-204ENST00000480923 CEP135Q66GS9 1140 aa21.65■■□□□ 1.06
VPS36-204ENST00000480923 DCP1BQ8IZD4 617 aaKnown RBP21.65■■□□□ 1.06
VPS36-204ENST00000480923 TMEM86AQ8N2M4 240 aa21.65■■□□□ 1.06
VPS36-204ENST00000480923 TOP6BLQ8N6T0 577 aa21.65■■□□□ 1.06
VPS36-204ENST00000480923 ST13P5Q8NFI4 369 aaPredicted RBP21.65■■□□□ 1.06
VPS36-204ENST00000480923 NXPE3Q969Y0 559 aa21.65■■□□□ 1.06
VPS36-204ENST00000480923 PBXIP1Q96AQ6 731 aa21.65■■□□□ 1.06
VPS36-204ENST00000480923 RMND1Q9NWS8 449 aa21.65■■□□□ 1.06
VPS36-204ENST00000480923 CEP72Q9P209 647 aa21.65■■□□□ 1.06
VPS36-204ENST00000480923 EPHB3P54753 998 aa21.64■■□□□ 1.05
VPS36-204ENST00000480923 MYL7Q01449 175 aa21.64■■□□□ 1.05
VPS36-204ENST00000480923 SLC5A9Q2M3M2 681 aa21.64■■□□□ 1.05
VPS36-204ENST00000480923 CYP4A22Q5TCH4 519 aa21.64■■□□□ 1.05
VPS36-204ENST00000480923 PDZD4Q76G19 769 aaPredicted RBP21.64■■□□□ 1.05
VPS36-204ENST00000480923 NPAS3Q8IXF0 933 aa21.64■■□□□ 1.05
VPS36-204ENST00000480923 ADGRF2Q8IZF7 708 aa21.64■■□□□ 1.05
VPS36-204ENST00000480923 HS6ST3Q8IZP7 471 aa21.64■■□□□ 1.05
VPS36-204ENST00000480923 GUF1Q8N442 669 aaKnown RBP21.64■■□□□ 1.05
VPS36-204ENST00000480923 ASIC4Q96FT7 647 aa21.64■■□□□ 1.05
VPS36-204ENST00000480923 SEPT5Q99719 369 aaPredicted RBP21.64■■□□□ 1.05
VPS36-204ENST00000480923 GZF1Q9H116 711 aaPredicted RBP21.64■■□□□ 1.05
VPS36-204ENST00000480923 AVENQ9NQS1 362 aaPredicted RBP21.64■■□□□ 1.05
VPS36-204ENST00000480923 DDX43Q9NXZ2 648 aaKnown RBP21.64■■□□□ 1.05
VPS36-204ENST00000480923 HOOK1Q9UJC3 728 aaKnown RBP21.64■■□□□ 1.05
VPS36-204ENST00000480923 TRAF3IP3Q9Y228 551 aa21.64■■□□□ 1.05
VPS36-204ENST00000480923 FRMD4BQ9Y2L6 1034 aa21.64■■□□□ 1.05
VPS36-204ENST00000480923 TSC2P49815 1807 aa21.64■■□□□ 1.05
VPS36-204ENST00000480923 ZNF197O14709 1029 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 PHACTR2O75167 634 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 SOAT2O75908 522 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 SMC2O95347 1197 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 SMARCB1Q12824 385 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 BIRC3Q13489 604 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 TRPC3Q13507 836 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 HTR4Q13639 388 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 MGAT5BQ3V5L5 792 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 LRRTM3Q86VH5 581 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 TTC9BQ8N6N2 239 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 PLEKHO2Q8TD55 490 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 C2orf15Q8WU43 125 aaKnown RBP21.63■■□□□ 1.05
VPS36-204ENST00000480923 TMEM174Q8WUU8 243 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 ZNF516Q92618 1163 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 MCRS1Q96EZ8 462 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 TIGD1Q96MW7 591 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 ASAH2Q9NR71 780 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 ABI2Q9NYB9 513 aaPredicted RBP21.63■■□□□ 1.05
VPS36-204ENST00000480923 RAPGEFL1Q9UHV5 662 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 DUSP12Q9UNI6 340 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 NUMBLQ9Y6R0 609 aa21.63■■□□□ 1.05
VPS36-204ENST00000480923 LRRIQ3A6PVS8 624 aaPredicted RBP21.62■■□□□ 1.05
VPS36-204ENST00000480923 ANHXE9PGG2 379 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 CST3P01034 146 aaPredicted RBP21.62■■□□□ 1.05
VPS36-204ENST00000480923 MYL4P12829 197 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 CEBPBP17676 345 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 ACAT1P24752 427 aaKnown RBP21.62■■□□□ 1.05
VPS36-204ENST00000480923 LHX1P48742 406 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 TUFMP49411 452 aaKnown RBP21.62■■□□□ 1.05
VPS36-204ENST00000480923 SOWAHAQ2M3V2 549 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 PRSS36Q5K4E3 855 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 BMP8AQ7Z5Y6 402 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 OSTM1Q86WC4 334 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 SMYD4Q8IYR2 804 aaPredicted RBP21.62■■□□□ 1.05
VPS36-204ENST00000480923 SLC44A3Q8N4M1 653 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 LEMD2Q8NC56 503 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 SPATA18Q8TC71 538 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 FAM200AQ8TCP9 573 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 SPPL2BQ8TCT7 592 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 PARD3BQ8TEW8 1205 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 ERCC4Q92889 916 aaPredicted RBP21.62■■□□□ 1.05
VPS36-204ENST00000480923 SMARCE1Q969G3 411 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 TCEAL4Q96EI5 215 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 MMS19Q96T76 1030 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 ACBD6Q9BR61 282 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 HSFX1Q9UBD0 423 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms