RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 TBC1D17Q9HA65 648 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 ANO10Q9NW15 660 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 FNIP2Q9P278 1114 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 DACH1Q9UI36 760 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 RWDD2AQ9UIY3 292 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 ADAM28Q9UKQ2 775 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 FBXL21Q9UKT6 434 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 R4GN57 208 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 PTPRJQ12913 1337 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 GPR179Q6PRD1 2367 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 LRRIQ3A6PVS8 624 aaPredicted RBP9.77□□□□□ -0.85
VCP-206ENST00000480327 PPEF2O14830 753 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 ZMYND10O75800 440 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 LETM1O95202 739 aaPredicted RBP9.77□□□□□ -0.85
VCP-206ENST00000480327 C1RP00736 705 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 DCNP07585 359 aaKnown RBP9.77□□□□□ -0.85
VCP-206ENST00000480327 TMEM191BP0C7N4 346 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 SRFP11831 508 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 KRT13P13646 458 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 TNNI1P19237 187 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 PSMC2P35998 433 aaKnown RBP9.77□□□□□ -0.85
VCP-206ENST00000480327 CLCNKBP51801 687 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 DLG4P78352 724 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 NTHL1P78549 312 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 MYBPC2Q14324 1141 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 PSMD6Q15008 389 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 ZBTB6Q15916 424 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 NFIL3Q16649 462 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 TPD52L1Q16890 204 aaPredicted RBP9.77□□□□□ -0.85
VCP-206ENST00000480327 ZSCAN23Q3MJ62 389 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 HSP90AA4PQ58FG1 418 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 SCARA3Q6AZY7 606 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 MAML2Q8IZL2 1156 aaPredicted RBP9.77□□□□□ -0.85
VCP-206ENST00000480327 BEST2Q8NFU1 509 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 OR5B17Q8NGF7 314 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 RIN2Q8WYP3 895 aaPredicted RBP9.77□□□□□ -0.85
VCP-206ENST00000480327 FGF14Q92915 247 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 FNBP1Q96RU3 617 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 CLSTN3Q9BQT9 956 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 COLEC11Q9BWP8 271 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 SRRTQ9BXP5 876 aaKnown RBP9.77□□□□□ -0.85
VCP-206ENST00000480327 MTMR12Q9C0I1 747 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 PLEKHA4Q9H4M7 779 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 MMRN2Q9H8L6 949 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 SLC38A7Q9NVC3 462 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 ZDHHC7Q9NXF8 308 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 DPP3Q9NY33 737 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 FBXW11Q9UKB1 542 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 UBQLN1Q9UMX0 589 aaKnown RBP9.77□□□□□ -0.85
VCP-206ENST00000480327 SSX2IPQ9Y2D8 614 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 NUMBLQ9Y6R0 609 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 TICRRQ7Z2Z1 1910 aa9.77□□□□□ -0.85
VCP-206ENST00000480327 I3L4J1 428 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 PODXLO00592 558 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 XPOTO43592 962 aaKnown RBP9.76□□□□□ -0.85
VCP-206ENST00000480327 TADA2AO75478 443 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 B3GAT3O94766 335 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 KIF4AO95239 1232 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 TNNC2P02585 160 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 KRT19P08727 400 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 TRIM49P0CI25 452 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 TRIM49CP0CI26 452 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 EPB41P11171 864 aaKnown RBP9.76□□□□□ -0.85
VCP-206ENST00000480327 ERCC5P28715 1186 aaPredicted RBP9.76□□□□□ -0.85
VCP-206ENST00000480327 VAMP7P51809 220 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 HSP90AA2PQ14568 343 aaPredicted RBP9.76□□□□□ -0.85
VCP-206ENST00000480327 SURF1Q15526 300 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 USP41Q3LFD5 358 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 CCDC40Q4G0X9 1142 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 ANO6Q4KMQ2 910 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 DCAF17Q5H9S7 520 aaPredicted RBP9.76□□□□□ -0.85
VCP-206ENST00000480327 TCERG1LQ5VWI1 586 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 SPATA1Q5VX52 437 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 PARM1Q6UWI2 310 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 CD300LGQ6UXG3 332 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 RSPO2Q6UXX9 243 aaPredicted RBP9.76□□□□□ -0.85
VCP-206ENST00000480327 GET4Q7L5D6 327 aaPredicted RBP9.76□□□□□ -0.85
VCP-206ENST00000480327 GPR65Q8IYL9 337 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 LNX1Q8TBB1 728 aaPredicted RBP9.76□□□□□ -0.85
VCP-206ENST00000480327 CACTINQ8WUQ7 758 aaKnown RBP9.76□□□□□ -0.85
VCP-206ENST00000480327 TMEM174Q8WUU8 243 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 ZNF516Q92618 1163 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 ANKRD36BP1Q96IX9 119 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 CGRRF1Q99675 332 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 FOXQ1Q9C009 403 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 SLC2A4RGQ9NR83 387 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 INTS13Q9NVM9 706 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 DERAQ9Y315 318 aa9.76□□□□□ -0.85
VCP-206ENST00000480327 SHISA7A6NL88 538 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 SLC16A3O15427 465 aaKnown RBP9.75□□□□□ -0.85
VCP-206ENST00000480327 PHACTR2O75167 634 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 CLSTN1O94985 981 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 ITGB3P05106 788 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 SP9P0CG40 484 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 CCDC192P0DO97 292 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 CYP3A5P20815 502 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 POLR2BP30876 1174 aaKnown RBP9.75□□□□□ -0.85
VCP-206ENST00000480327 BRCC3P46736 316 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 ID4P47928 161 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 GCLMP48507 274 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms