RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 SLC39A11Q8N1S5 342 aa17.98■□□□□ 0.47
SCAMP3-207ENST00000480219 DDX1Q92499 740 aaKnown RBP17.98■□□□□ 0.47
SCAMP3-207ENST00000480219 RABGGTAQ92696 567 aa17.98■□□□□ 0.47
SCAMP3-207ENST00000480219 CHP1Q99653 195 aa17.98■□□□□ 0.47
SCAMP3-207ENST00000480219 NOCTQ9UK39 431 aaKnown RBP17.98■□□□□ 0.47
SCAMP3-207ENST00000480219 KIAA1257Q9ULG3 409 aa17.98■□□□□ 0.47
SCAMP3-207ENST00000480219 NME7Q9Y5B8 376 aa17.98■□□□□ 0.47
SCAMP3-207ENST00000480219 ARHGAP6O43182 974 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 CYP11B1P15538 503 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 CD58P19256 250 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 BMP8BP34820 402 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 BRCC3P46736 316 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 LHX1P48742 406 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 KLHL30Q0D2K2 578 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 ELAVL2Q12926 359 aaKnown RBP17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 C9orf50Q5SZB4 431 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 KCNT2Q6UVM3 1135 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 DSTYKQ6XUX3 929 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 OSTM1Q86WC4 334 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 SLC4A11Q8NBS3 891 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 TMEM176AQ96HP8 235 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 ZNF558Q96NG5 402 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 TWNKQ96RR1 684 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 NT5C1AQ9BXI3 368 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 ELOVL4Q9GZR5 314 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 HAUS4Q9H6D7 363 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 NENFQ9UMX5 172 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 STXBP5LQ9Y2K9 1186 aa17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 PRG3Q9Y2Y8 225 aaPredicted RBP17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 SF3B1O75533 1304 aaKnown RBP eCLIP17.97■□□□□ 0.47
SCAMP3-207ENST00000480219 KIAA1671Q9BY89 1806 aa17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 NRDCO43847 1150 aa17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 TADA2AO75478 443 aa17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 LCA5LO95447 670 aa17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 KRT5P13647 590 aa17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 FGFR3P22607 806 aa17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 ALDH7A1P49419 539 aaKnown RBP17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 NDST1P52848 882 aa17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 PTK2Q05397 1052 aa17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 MRPL58Q14197 206 aaKnown RBP17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 SHHQ15465 462 aa17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 WSCD1Q658N2 575 aa17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 FAM117BQ6P1L5 589 aa17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 ZNF571Q7Z3V5 609 aaPredicted RBP17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 NOP9Q86U38 636 aaKnown RBP17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 SLC47A2Q86VL8 602 aa17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 TMEM173Q86WV6 379 aaPredicted RBP17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 COLGALT1Q8NBJ5 622 aa17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 BCL7CQ8WUZ0 217 aaPredicted RBP17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 IGSF21Q96ID5 467 aa17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 NHEJ1Q9H9Q4 299 aaPredicted RBP17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 STK39Q9UEW8 545 aa17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 HMGXB4Q9UGU5 601 aa17.96■□□□□ 0.47
SCAMP3-207ENST00000480219 CLSTN1O94985 981 aa17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 OAZ2O95190 189 aa17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 PLEKP08567 350 aaPredicted RBP17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 SKILP12757 684 aa17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 CHRNB2P17787 502 aa17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 PPM1AP35813 382 aa17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 GNL1P36915 607 aaPredicted RBP17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 PDE6CP51160 858 aa17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 CDR2Q01850 454 aa17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 BMS1Q14692 1282 aaKnown RBP17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 FUT10Q6P4F1 479 aa17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 GPR65Q8IYL9 337 aa17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 FIBCD1Q8N539 461 aa17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 SLC30A5Q8TAD4 765 aa17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 RTP3Q9BQQ7 232 aa17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 GPR62Q9BZJ7 368 aa17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 AAASQ9NRG9 546 aa17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 CHST7Q9NS84 486 aa17.95■□□□□ 0.46
SCAMP3-207ENST00000480219 I3L4J1 428 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 TLL1O43897 1013 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 VDRP11473 427 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 GNA15P30679 374 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 EIF4A3P38919 411 aaKnown RBP17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 USP8P40818 1118 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 ARID5AQ03989 594 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 ARHGAP17Q68EM7 881 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 RAD9BQ6WBX8 426 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 HASPINQ8TF76 798 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 RNPC3Q96LT9 517 aaKnown RBP17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 AGPAT1Q99943 283 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 ZSWIM1Q9BR11 485 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 ACBD6Q9BR61 282 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 ZBED2Q9BTP6 218 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 OXCT2Q9BYC2 517 aaPredicted RBP17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 DNAI2Q9GZS0 605 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 SNX25Q9H3E2 840 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 ACP6Q9NPH0 428 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 PCDHGC3Q9UN70 934 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 ATP8B3O60423 1300 aa17.94■□□□□ 0.46
SCAMP3-207ENST00000480219 TNRC18O15417 2968 aaPredicted RBP17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 SOWAHDA6NJG2 315 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 A8MXQ7 604 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 EIF3CLB5ME19 914 aaKnown RBP17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 H0YGN5 161 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 TBC1D4O60343 1298 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms