RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 MSANTD3Q96H12 275 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 LRRC3BQ96PB8 259 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 PGLYRP2Q96PD5 576 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 REEP2Q9BRK0 252 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 LRRC3Q9BY71 257 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 C8orf33Q9H7E9 229 aaPredicted RBP7.68□□□□□ -1.18
COL17A1-205ENST00000480127 MRPL44Q9H9J2 332 aaKnown RBP7.68□□□□□ -1.18
COL17A1-205ENST00000480127 PLEKHA5Q9HAU0 1116 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 PTPRHQ9HD43 1115 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 CNTN3Q9P232 1028 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 TUBGCP4Q9UGJ1 667 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 AFF4Q9UHB7 1163 aaKnown RBP7.68□□□□□ -1.18
COL17A1-205ENST00000480127 EXOC7Q9UPT5 735 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 TIMM13Q9Y5L4 95 aaPredicted RBP7.68□□□□□ -1.18
COL17A1-205ENST00000480127 F5P12259 2224 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 MYBPHLA2RUH7 354 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 SPECC1L-ADORA2AF8WAN1 911 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 AXIN1O15169 862 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 OGTO15294 1046 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 CHADO15335 359 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 MEFVO15553 781 aaPredicted RBP7.67□□□□□ -1.18
COL17A1-205ENST00000480127 SLC26A4O43511 780 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 TRAK2O60296 914 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 VNN2O95498 520 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 ZNF806P0C7X5 589 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 CTHP32929 405 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 STAT6P42226 847 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 KPNA1P52294 538 aaPredicted RBP7.67□□□□□ -1.18
COL17A1-205ENST00000480127 SLC12A3P55017 1021 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 MCL1Q07820 350 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 CCINQ13939 588 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 CCDC6Q16204 474 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 AASDHQ4L235 1098 aaPredicted RBP7.67□□□□□ -1.18
COL17A1-205ENST00000480127 DGKKQ5KSL6 1271 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 SLFN12LQ6IEE8 588 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 C1orf228Q6PIY5 440 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 RNF19BQ6ZMZ0 732 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 STXBP4Q6ZWJ1 553 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 CEP68Q76N32 757 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 SV2BQ7L1I2 683 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 DYMQ7RTS9 669 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 ITIH5Q86UX2 942 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 TMC8Q8IU68 726 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 GPIHBP1Q8IV16 184 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 CD302Q8IX05 232 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 DAW1Q8N136 415 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 THEM5Q8N1Q8 247 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 CSGALNACT1Q8TDX6 532 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 RAD54LQ92698 747 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 DDX12PQ92771 950 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 E2F7Q96AV8 911 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 SUSD3Q96L08 255 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 KIF2CQ99661 725 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 SEPT5Q99719 369 aaPredicted RBP7.67□□□□□ -1.18
COL17A1-205ENST00000480127 MMTAG2Q9BU76 263 aaKnown RBP7.67□□□□□ -1.18
COL17A1-205ENST00000480127 MKNK1Q9BUB5 465 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 GPR88Q9GZN0 384 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 DNAJC25Q9H1X3 360 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 ARRDC1-AS1Q9H2J1 176 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 TBC1D7Q9P0N9 293 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 MAFFQ9ULX9 164 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 TBX20Q9UMR3 447 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 PCDHB8Q9UN66 801 aa7.67□□□□□ -1.18
COL17A1-205ENST00000480127 A0A1W2PRU2 124 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 OR6C75A6NL08 312 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 LACTBL1A8MY62 500 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 ABLIM1O14639 778 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 EXTL3O43909 919 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 EPN2O95208 641 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 KCNK5O95279 499 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 GCNT3O95395 438 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 PROS1P07225 676 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 KRT19P08727 400 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 RAP1GAPP47736 663 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 TFAMQ00059 246 aaKnown RBP7.66□□□□□ -1.18
COL17A1-205ENST00000480127 TSPY1Q01534 308 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 MAPK7Q13164 816 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 POSTNQ15063 836 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 PON2Q15165 354 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 STK38Q15208 465 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 IL17AQ16552 155 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 MGAT5BQ3V5L5 792 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 TMEM119Q4V9L6 283 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 PLA2G2CQ5R387 149 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 STXBP5Q5T5C0 1151 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 STPG1Q5TH74 334 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 PKN3Q6P5Z2 889 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 CCDC73Q6ZRK6 1079 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 TAS1R3Q7RTX0 852 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 KBTBD6Q86V97 674 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 RALGPS2Q86X27 583 aaPredicted RBP7.66□□□□□ -1.18
COL17A1-205ENST00000480127 ARID3BQ8IVW6 561 aaPredicted RBP7.66□□□□□ -1.18
COL17A1-205ENST00000480127 C12orf50Q8NA57 414 aaPredicted RBP7.66□□□□□ -1.18
COL17A1-205ENST00000480127 TTC8Q8TAM2 541 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 CACTINQ8WUQ7 758 aaKnown RBP7.66□□□□□ -1.18
COL17A1-205ENST00000480127 GAB3Q8WWW8 586 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 LOXL4Q96JB6 756 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 ZFYVE19Q96K21 471 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 ZNF560Q96MR9 790 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 PNMA5Q96PV4 448 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms