RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 RSRC1Q96IZ7 334 aaKnown RBP7.05□□□□□ -1.28
PBRM1-220ENST00000480064 COG8Q96MW5 612 aa7.05□□□□□ -1.28
PBRM1-220ENST00000480064 C7orf26Q96N11 449 aa7.05□□□□□ -1.28
PBRM1-220ENST00000480064 CCDC68Q9H2F9 335 aa7.05□□□□□ -1.28
PBRM1-220ENST00000480064 SMURF2Q9HAU4 748 aa7.05□□□□□ -1.28
PBRM1-220ENST00000480064 DLL4Q9NR61 685 aa7.05□□□□□ -1.28
PBRM1-220ENST00000480064 TLR9Q9NR96 1032 aa7.05□□□□□ -1.28
PBRM1-220ENST00000480064 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.05□□□□□ -1.28
PBRM1-220ENST00000480064 USP40Q9NVE5 1235 aa7.05□□□□□ -1.28
PBRM1-220ENST00000480064 NKIRAS2Q9NYR9 191 aa7.05□□□□□ -1.28
PBRM1-220ENST00000480064 HSPBP1Q9NZL4 362 aa7.05□□□□□ -1.28
PBRM1-220ENST00000480064 ORC3Q9UBD5 711 aaPredicted RBP7.05□□□□□ -1.28
PBRM1-220ENST00000480064 GPR34Q9UPC5 381 aa7.05□□□□□ -1.28
PBRM1-220ENST00000480064 A0A1W2PPH5 198 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 PGPEP1LA6NFU8 196 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 AMY1AP04745 511 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 TXNP10599 105 aaKnown RBP7.04□□□□□ -1.28
PBRM1-220ENST00000480064 RXRAP19793 462 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 GABRB3P28472 473 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 HOXD12P35452 270 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 DRG2P55039 364 aaKnown RBP7.04□□□□□ -1.28
PBRM1-220ENST00000480064 RNASE9P60153 205 aaKnown RBP7.04□□□□□ -1.28
PBRM1-220ENST00000480064 ACTR2P61160 394 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 AP2B1P63010 937 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 NOMO3P69849 1222 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 CD83Q01151 205 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 NR1I3Q14994 352 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 UBE3CQ15386 1083 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 WDR72Q3MJ13 1102 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 CCDC184Q52MB2 194 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 C19orf54Q5BKX5 351 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 KANK2Q63ZY3 851 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 GALNT5Q7Z7M9 940 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 MIB1Q86YT6 1006 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 IRF2BP1Q8IU81 584 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 ZUFSPQ96AP4 578 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 HVCN1Q96D96 273 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 TSPAN17Q96FV3 270 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 PACSIN1Q9BY11 444 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 C11orf54Q9H0W9 315 aaPredicted RBP7.04□□□□□ -1.28
PBRM1-220ENST00000480064 SLC6A17Q9H1V8 727 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 CHST8Q9H2A9 424 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 MLXIPQ9HAP2 919 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 ANKEF1Q9NU02 776 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 SPATA6Q9NWH7 488 aaPredicted RBP7.04□□□□□ -1.28
PBRM1-220ENST00000480064 CFAP97Q9P2B7 532 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 MID2Q9UJV3 735 aa7.04□□□□□ -1.28
PBRM1-220ENST00000480064 RUVBL1Q9Y265 456 aaKnown RBP7.04□□□□□ -1.28
PBRM1-220ENST00000480064 MTO1Q9Y2Z2 717 aaKnown RBP7.04□□□□□ -1.28
PBRM1-220ENST00000480064 PLOD3O60568 738 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 FAM155BO75949 473 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 MATN4O95460 622 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 SLC3A2P08195 630 aaKnown RBP7.03□□□□□ -1.28
PBRM1-220ENST00000480064 IL2RBP14784 551 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 HNRNPLP14866 589 aaKnown RBP eCLIP7.03□□□□□ -1.28
PBRM1-220ENST00000480064 NPPBP16860 134 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 CRHR1P34998 444 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 PTPN7P35236 360 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 GLRBP48167 497 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 NR1H2P55055 460 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 WNT3AP56704 352 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 CTBP1Q13363 440 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 MTM1Q13496 603 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 MEA1Q16626 185 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 TIGD5Q53EQ6 642 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 C1QTNF12Q5T7M4 302 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 ATPAF1Q5TC12 328 aaPredicted RBP7.03□□□□□ -1.28
PBRM1-220ENST00000480064 LIPIQ6XZB0 460 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 CCDC129Q6ZRS4 1044 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 CXXC5Q7LFL8 322 aaKnown RBP7.03□□□□□ -1.28
PBRM1-220ENST00000480064 AOPEPQ8N6M6 819 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 VGLL2Q8N8G2 317 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 ANKRD52Q8NB46 1076 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 CEP70Q8NHQ1 597 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 TDRD7Q8NHU6 1098 aaKnown RBP7.03□□□□□ -1.28
PBRM1-220ENST00000480064 ADAMTS18Q8TE60 1221 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 CASKIN2Q8WXE0 1202 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 RFFLQ8WZ73 363 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 SPSB4Q96A44 273 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 TACO1Q9BSH4 297 aaKnown RBP7.03□□□□□ -1.28
PBRM1-220ENST00000480064 RTKNQ9BST9 563 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 ALDH8A1Q9H2A2 487 aaPredicted RBP7.03□□□□□ -1.28
PBRM1-220ENST00000480064 TAF1DQ9H5J8 278 aaPredicted RBP7.03□□□□□ -1.28
PBRM1-220ENST00000480064 SH3GLB2Q9NR46 395 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 RBPJLQ9UBG7 517 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 TRPS1Q9UHF7 1281 aa7.03□□□□□ -1.28
PBRM1-220ENST00000480064 SCAF8Q9UPN6 1271 aaKnown RBP7.03□□□□□ -1.28
PBRM1-220ENST00000480064 SYNDIG1LA6NDD5 238 aa7.02□□□□□ -1.29
PBRM1-220ENST00000480064 NUDT19A8MXV4 375 aa7.02□□□□□ -1.29
PBRM1-220ENST00000480064 ADCY6O43306 1168 aa7.02□□□□□ -1.29
PBRM1-220ENST00000480064 USP1O94782 785 aa7.02□□□□□ -1.29
PBRM1-220ENST00000480064 GAAP10253 952 aa7.02□□□□□ -1.29
PBRM1-220ENST00000480064 MTHFD1P11586 935 aaKnown RBP7.02□□□□□ -1.29
PBRM1-220ENST00000480064 IL1R1P14778 569 aa7.02□□□□□ -1.29
PBRM1-220ENST00000480064 PNLIPP16233 465 aa7.02□□□□□ -1.29
PBRM1-220ENST00000480064 EGR1P18146 543 aa7.02□□□□□ -1.29
PBRM1-220ENST00000480064 CHMP24386 653 aa7.02□□□□□ -1.29
PBRM1-220ENST00000480064 THBS2P35442 1172 aa7.02□□□□□ -1.29
PBRM1-220ENST00000480064 ADCY8P40145 1251 aa7.02□□□□□ -1.29
PBRM1-220ENST00000480064 PHKA1P46020 1223 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms