RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 GLG1Q92896 1179 aa13.9□□□□□ -0.18
CNKSR3-204ENST00000479339 DGCR14Q96DF8 476 aaKnown RBP13.9□□□□□ -0.18
CNKSR3-204ENST00000479339 CEP95Q96GE4 821 aa13.9□□□□□ -0.18
CNKSR3-204ENST00000479339 ECSITQ9BQ95 431 aa13.9□□□□□ -0.18
CNKSR3-204ENST00000479339 UBN1Q9NPG3 1134 aa13.9□□□□□ -0.18
CNKSR3-204ENST00000479339 FBXO28Q9NVF7 368 aa13.9□□□□□ -0.18
CNKSR3-204ENST00000479339 PCDHA4Q9UN74 947 aa13.9□□□□□ -0.18
CNKSR3-204ENST00000479339 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 CCDC194A0A1B0GVG4 234 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 FAM47DPA6NHR8 397 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 F5H6K3 240 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 EDF1O60869 148 aaKnown RBP13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 CBX6O95503 412 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 ASMTLO95671 621 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 NDUFB10O96000 172 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 IGHA2P01877 340 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 KRT13P13646 458 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 OXCT1P55809 520 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 CACNB2Q08289 660 aaPredicted RBP13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 TROAPQ12815 778 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 HNRNPDQ14103 355 aaKnown RBP13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 GRM2Q14416 872 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 P3H1Q32P28 736 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 RFWD3Q6PCD5 774 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 DSTYKQ6XUX3 929 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 B3GNT6Q6ZMB0 384 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 ABRAQ8N0Z2 381 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 MCUR1Q96AQ8 359 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 MIPEPQ99797 713 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 HTATIP2Q9BUP3 242 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 OXCT2Q9BYC2 517 aaPredicted RBP13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 UBA5Q9GZZ9 404 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 BRD8Q9H0E9 1235 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 PCDHA3Q9Y5H8 950 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 ZNF236Q9UL36 1845 aa13.89□□□□□ -0.19
CNKSR3-204ENST00000479339 hCG_1642624A0A1W2PR95 340 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 CDH16O75309 829 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 SLC25A27O95847 323 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 TROVE2P10155 538 aaKnown RBP eCLIP13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 PCP11498 1178 aaKnown RBP13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 SMARCA1P28370 1054 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 FOXN2P32314 431 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 ACADVLP49748 655 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 CLCN2P51788 898 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 CALCOCO2Q13137 446 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 DCTN2Q13561 401 aaKnown RBP13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 MPP2Q14168 576 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 TMEM132BQ14DG7 1078 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 TAF1BQ53T94 588 aaPredicted RBP13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 FYB2Q5VWT5 728 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 MFSD14CQ5VZR4 134 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 DNAJC14Q6Y2X3 702 aaPredicted RBP13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 FAM47EQ6ZV65 393 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 PASD1Q8IV76 773 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 TRIM59Q8IWR1 403 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 KBTBD2Q8IY47 623 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 ENAHQ8N8S7 591 aaPredicted RBP13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 GMCL1P1Q8NEA9 526 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 REPS2Q8NFH8 660 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 NPLOC4Q8TAT6 608 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 RFFLQ8WZ73 363 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 CALML4Q96GE6 196 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 AGBL1Q96MI9 1066 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 PLIN2Q99541 437 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 CORO1BQ9BR76 489 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 POLR3CQ9BUI4 534 aaPredicted RBP13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 CDC42EP4Q9H3Q1 356 aaKnown RBP13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 MLXIPLQ9NP71 852 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 ZDHHC7Q9NXF8 308 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 OGDHLQ9ULD0 1010 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 NR2E1Q9Y466 385 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 CENPFP49454 3210 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 PARP14Q460N5 1801 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 VWA5AO00534 786 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 GSC2O15499 205 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 TSPY3P0CV98 308 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 TSPY8P0CW00 308 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 ETS2P15036 469 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 CREB1P16220 341 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 CTNNA2P26232 953 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 MLH1P40692 756 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 TFAP4Q01664 338 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 PRPF4BQ13523 1007 aaKnown RBP13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 SPARCL1Q14515 664 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 DCAF12L1Q5VU92 463 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 OLFML2BQ68BL8 750 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 IZUMO2Q6UXV1 221 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 ARMCX6Q7L4S7 300 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 RIOX2Q8IUF8 465 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 CCDC65Q8IXS2 484 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 DAGLBQ8NCG7 672 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 ERVK-5Q9HDB9 667 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 FLRT1Q9NZU1 646 aa13.88□□□□□ -0.19
CNKSR3-204ENST00000479339 MIF4GDA9UHW6 222 aaKnown RBP13.87□□□□□ -0.19
CNKSR3-204ENST00000479339 FGRP09769 529 aa13.87□□□□□ -0.19
CNKSR3-204ENST00000479339 CYP11B2P19099 503 aa13.87□□□□□ -0.19
CNKSR3-204ENST00000479339 ADORA2AP29274 412 aa13.87□□□□□ -0.19
CNKSR3-204ENST00000479339 COPB2P35606 906 aa13.87□□□□□ -0.19
CNKSR3-204ENST00000479339 XIAPP98170 497 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms