RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 SLC20A1Q8WUM9 679 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 DDX1Q92499 740 aaKnown RBP14.01□□□□□ -0.17
CHD3-210ENST00000479080 ZNF558Q96NG5 402 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 MMS19Q96T76 1030 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 CHP1Q99653 195 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 MTIF3Q9H2K0 278 aaKnown RBP14.01□□□□□ -0.17
CHD3-210ENST00000479080 NOCTQ9UK39 431 aaKnown RBP14.01□□□□□ -0.17
CHD3-210ENST00000479080 INSL6Q9Y581 213 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 VWA8A3KMH1 1905 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 GBF1Q92538 1859 aa14□□□□□ -0.17
CHD3-210ENST00000479080 CLSTN1O94985 981 aa14□□□□□ -0.17
CHD3-210ENST00000479080 ALDH2P05091 517 aa14□□□□□ -0.17
CHD3-210ENST00000479080 CHRNB2P17787 502 aa14□□□□□ -0.17
CHD3-210ENST00000479080 TYMPP19971 482 aa14□□□□□ -0.17
CHD3-210ENST00000479080 FGFR3P22607 806 aa14□□□□□ -0.17
CHD3-210ENST00000479080 MRPL58Q14197 206 aaKnown RBP14□□□□□ -0.17
CHD3-210ENST00000479080 ZNF394Q53GI3 561 aa14□□□□□ -0.17
CHD3-210ENST00000479080 RTP2Q5QGT7 225 aa14□□□□□ -0.17
CHD3-210ENST00000479080 TMEM270Q6UE05 265 aa14□□□□□ -0.17
CHD3-210ENST00000479080 DSTYKQ6XUX3 929 aa14□□□□□ -0.17
CHD3-210ENST00000479080 DPH6Q7L8W6 267 aa14□□□□□ -0.17
CHD3-210ENST00000479080 NOP9Q86U38 636 aaKnown RBP14□□□□□ -0.17
CHD3-210ENST00000479080 SLC47A2Q86VL8 602 aa14□□□□□ -0.17
CHD3-210ENST00000479080 CNGA4Q8IV77 575 aa14□□□□□ -0.17
CHD3-210ENST00000479080 FIBCD1Q8N539 461 aa14□□□□□ -0.17
CHD3-210ENST00000479080 OR8K1Q8NGG5 319 aa14□□□□□ -0.17
CHD3-210ENST00000479080 OR10T2Q8NGX3 314 aa14□□□□□ -0.17
CHD3-210ENST00000479080 EPS8L1Q8TE68 723 aa14□□□□□ -0.17
CHD3-210ENST00000479080 TFAP2BQ92481 460 aa14□□□□□ -0.17
CHD3-210ENST00000479080 SYN2Q92777 582 aaPredicted RBP14□□□□□ -0.17
CHD3-210ENST00000479080 JAKMIP2Q96AA8 810 aa14□□□□□ -0.17
CHD3-210ENST00000479080 SPAG5Q96R06 1193 aa14□□□□□ -0.17
CHD3-210ENST00000479080 PANX2Q96RD6 677 aa14□□□□□ -0.17
CHD3-210ENST00000479080 TMEM209Q96SK2 561 aa14□□□□□ -0.17
CHD3-210ENST00000479080 PKMYT1Q99640 499 aa14□□□□□ -0.17
CHD3-210ENST00000479080 C17orf80Q9BSJ5 609 aa14□□□□□ -0.17
CHD3-210ENST00000479080 ZBED2Q9BTP6 218 aa14□□□□□ -0.17
CHD3-210ENST00000479080 COLEC11Q9BWP8 271 aa14□□□□□ -0.17
CHD3-210ENST00000479080 BARX2Q9UMQ3 279 aaPredicted RBP14□□□□□ -0.17
CHD3-210ENST00000479080 PCDHB4Q9Y5E5 795 aa14□□□□□ -0.17
CHD3-210ENST00000479080 TBC1D4O60343 1298 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 HUS1O60921 280 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 ATP2C2O75185 946 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 CA3P07451 260 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 KRT5P13647 590 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 ACAT1P24752 427 aaKnown RBP13.99□□□□□ -0.17
CHD3-210ENST00000479080 GSDMDP57764 484 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 MTF1Q14872 753 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 ASIC2Q16515 512 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 ASTE1Q2TB18 679 aaPredicted RBP13.99□□□□□ -0.17
CHD3-210ENST00000479080 SFMBT2Q5VUG0 894 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 RSPO2Q6UXX9 243 aaPredicted RBP13.99□□□□□ -0.17
CHD3-210ENST00000479080 RAD9BQ6WBX8 426 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 ZNF571Q7Z3V5 609 aaPredicted RBP13.99□□□□□ -0.17
CHD3-210ENST00000479080 PALB2Q86YC2 1186 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 LRRC8AQ8IWT6 810 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 APPL2Q8NEU8 664 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 LNX1Q8TBB1 728 aaPredicted RBP13.99□□□□□ -0.17
CHD3-210ENST00000479080 ANP32BQ92688 251 aaKnown RBP13.99□□□□□ -0.17
CHD3-210ENST00000479080 FAM81BQ96LP2 452 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 ZNF830Q96NB3 372 aaPredicted RBP13.99□□□□□ -0.17
CHD3-210ENST00000479080 HERC2P3Q9BVR0 1158 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 PBX4Q9BYU1 374 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 NENFQ9UMX5 172 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 STXBP5LQ9Y2K9 1186 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 R3HCC1Q9Y3T6 440 aaKnown RBP13.99□□□□□ -0.17
CHD3-210ENST00000479080 CHD9Q3L8U1 2897 aa13.99□□□□□ -0.17
CHD3-210ENST00000479080 CEP290O15078 2479 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 LAMA3Q16787 3333 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 TADA2AO75478 443 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 FAM163BP0C2L3 166 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 ODC1P11926 461 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 P4HA1P13674 534 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 FERP16591 822 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 PAX3P23760 479 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 BRD2P25440 801 aaKnown RBP13.98□□□□□ -0.17
CHD3-210ENST00000479080 PSMC1P62191 440 aaKnown RBP13.98□□□□□ -0.17
CHD3-210ENST00000479080 TAP1Q03518 808 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 ARID5AQ03989 594 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 SPOUT1Q5T280 376 aaKnown RBP13.98□□□□□ -0.17
CHD3-210ENST00000479080 FAM171A1Q5VUB5 890 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 CHRDL2Q6WN34 429 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 TMEM86AQ8N2M4 240 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 PCDHB18PQ96TA0 734 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 HAUS4Q9H6D7 363 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 CRTAC1Q9NQ79 661 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 CHST7Q9NS84 486 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 TMLHEQ9NVH6 421 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 SPG21Q9NZD8 308 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 PCDHA11Q9Y5I1 949 aa13.98□□□□□ -0.17
CHD3-210ENST00000479080 SF3B1O75533 1304 aaKnown RBP eCLIP13.97□□□□□ -0.176e-6■■■■■ 103.4
CHD3-210ENST00000479080 SOWAHDA6NJG2 315 aa13.97□□□□□ -0.17
CHD3-210ENST00000479080 ZNF263O14978 683 aa13.97□□□□□ -0.17
CHD3-210ENST00000479080 SYN3O14994 580 aa13.97□□□□□ -0.17
CHD3-210ENST00000479080 ADAM12O43184 909 aa13.97□□□□□ -0.17
CHD3-210ENST00000479080 FGF18O76093 207 aa13.97□□□□□ -0.17
CHD3-210ENST00000479080 OAZ2O95190 189 aa13.97□□□□□ -0.17
CHD3-210ENST00000479080 PDGFRBP09619 1106 aa13.97□□□□□ -0.17
CHD3-210ENST00000479080 OR4Q2P0C623 313 aa13.97□□□□□ -0.17
CHD3-210ENST00000479080 CYP11B1P15538 503 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms