RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 VCPP55072 806 aaKnown RBP22.34■■□□□ 1.17
SDF4-206ENST00000478938 CAV1Q03135 178 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 GK3PQ14409 553 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 FASTKD3Q14CZ7 662 aaKnown RBP22.34■■□□□ 1.17
SDF4-206ENST00000478938 ARHGAP44Q17R89 818 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 IZUMO3Q5VZ72 239 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 PCNX4Q63HM2 1172 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 ZNF410Q86VK4 478 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 ERMNQ8TAM6 284 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 USP6NLQ92738 828 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 ARPC5LQ9BPX5 153 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 IL17RBQ9NRM6 502 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 DCAF8L1A6NGE4 600 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 GOLGA8RI6L899 631 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 NCKAP1LP55160 1127 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 NOP14P78316 857 aaKnown RBP22.34■■□□□ 1.17
SDF4-206ENST00000478938 CLEC4GQ6UXB4 293 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 PPP4R3CPQ6ZMV5 832 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 GPBP1Q86WP2 473 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 KLF6Q99612 283 aaPredicted RBP22.34■■□□□ 1.17
SDF4-206ENST00000478938 MRPS26Q9BYN8 205 aaKnown RBP22.34■■□□□ 1.17
SDF4-206ENST00000478938 SAP30BPQ9UHR5 308 aaKnown RBP22.34■■□□□ 1.17
SDF4-206ENST00000478938 FAM32AQ9Y421 112 aaKnown RBP22.34■■□□□ 1.17
SDF4-206ENST00000478938 ANKRD36CQ5JPF3 1778 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 DCCP43146 1447 aa22.33■■□□□ 1.17
SDF4-206ENST00000478938 CBFA2T3O75081 653 aa22.33■■□□□ 1.17
SDF4-206ENST00000478938 ABHD2P08910 425 aa22.33■■□□□ 1.17
SDF4-206ENST00000478938 HADHBP55084 474 aaKnown RBP22.33■■□□□ 1.17
SDF4-206ENST00000478938 POU5F2Q8N7G0 328 aa22.33■■□□□ 1.17
SDF4-206ENST00000478938 ICA1LQ8NDH6 482 aa22.33■■□□□ 1.17
SDF4-206ENST00000478938 HIPK4Q8NE63 616 aa22.33■■□□□ 1.17
SDF4-206ENST00000478938 TCP10LQ8TDR4 215 aa22.33■■□□□ 1.17
SDF4-206ENST00000478938 ZFRQ96KR1 1074 aaKnown RBP22.33■■□□□ 1.17
SDF4-206ENST00000478938 CFAP57Q96MR6 1250 aa22.33■■□□□ 1.17
SDF4-206ENST00000478938 HERPUD2Q9BSE4 406 aa22.33■■□□□ 1.17
SDF4-206ENST00000478938 BRIP1Q9BX63 1249 aa22.33■■□□□ 1.17
SDF4-206ENST00000478938 SMYD3Q9H7B4 428 aa22.33■■□□□ 1.17
SDF4-206ENST00000478938 SENP1Q9P0U3 644 aa22.33■■□□□ 1.17
SDF4-206ENST00000478938 FADS3Q9Y5Q0 445 aa22.33■■□□□ 1.17
SDF4-206ENST00000478938 TNS3Q68CZ2 1445 aa22.33■■□□□ 1.16
SDF4-206ENST00000478938 CAPN14A8MX76 684 aa22.33■■□□□ 1.16
SDF4-206ENST00000478938 KLRF2D3W0D1 207 aa22.33■■□□□ 1.16
SDF4-206ENST00000478938 XPOTO43592 962 aaKnown RBP22.33■■□□□ 1.16
SDF4-206ENST00000478938 PIAS1O75925 651 aa22.33■■□□□ 1.16
SDF4-206ENST00000478938 SORBS2O94875 1100 aaKnown RBP22.33■■□□□ 1.16
SDF4-206ENST00000478938 CDH2P19022 906 aaPredicted RBP22.33■■□□□ 1.16
SDF4-206ENST00000478938 KRT81Q14533 505 aa22.33■■□□□ 1.16
SDF4-206ENST00000478938 GRM4Q14833 912 aa22.33■■□□□ 1.16
SDF4-206ENST00000478938 PACS1Q6VY07 963 aa22.33■■□□□ 1.16
SDF4-206ENST00000478938 PPM1KQ8N3J5 372 aa22.33■■□□□ 1.16
SDF4-206ENST00000478938 CEPT1Q9Y6K0 416 aa22.33■■□□□ 1.16
SDF4-206ENST00000478938 STRCQ7RTU9 1775 aa22.33■■□□□ 1.16
SDF4-206ENST00000478938 HOXD13P35453 343 aa22.32■■□□□ 1.16
SDF4-206ENST00000478938 AAGABQ6PD74 315 aa22.32■■□□□ 1.16
SDF4-206ENST00000478938 IYDQ6PHW0 289 aa22.32■■□□□ 1.16
SDF4-206ENST00000478938 PPP4R1Q8TF05 950 aa22.32■■□□□ 1.16
SDF4-206ENST00000478938 TMOD2Q9NZR1 351 aa22.32■■□□□ 1.16
SDF4-206ENST00000478938 PCDHB13Q9Y5F0 798 aa22.32■■□□□ 1.16
SDF4-206ENST00000478938 ARHGAP42A6NI28 874 aa22.32■■□□□ 1.16
SDF4-206ENST00000478938 SPECC1L-ADORA2AF8WAN1 911 aa22.32■■□□□ 1.16
SDF4-206ENST00000478938 DLGAP5Q15398 846 aa22.32■■□□□ 1.16
SDF4-206ENST00000478938 TGFBIQ15582 683 aa22.32■■□□□ 1.16
SDF4-206ENST00000478938 TDRPQ86YL5 185 aa22.32■■□□□ 1.16
SDF4-206ENST00000478938 ALDH16A1Q8IZ83 802 aa22.32■■□□□ 1.16
SDF4-206ENST00000478938 PRPF18Q99633 342 aaKnown RBP22.32■■□□□ 1.16
SDF4-206ENST00000478938 VPS37BQ9H9H4 285 aa22.32■■□□□ 1.16
SDF4-206ENST00000478938 PPARGC1AQ9UBK2 798 aaKnown RBP22.32■■□□□ 1.16
SDF4-206ENST00000478938 HESX1Q9UBX0 185 aa22.32■■□□□ 1.16
SDF4-206ENST00000478938 CROTQ9UKG9 612 aa22.32■■□□□ 1.16
SDF4-206ENST00000478938 CLEC11AQ9Y240 323 aa22.32■■□□□ 1.16
SDF4-206ENST00000478938 CLIC2O15247 247 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 LDHAP00338 332 aaKnown RBP22.31■■□□□ 1.16
SDF4-206ENST00000478938 PCP11498 1178 aaKnown RBP22.31■■□□□ 1.16
SDF4-206ENST00000478938 FDFT1P37268 417 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 SNAPC2Q13487 334 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 BCL2A1Q16548 175 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 CROCCP3Q8IVE0 287 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 SLC5A5Q92911 643 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 RAB34Q9BZG1 259 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 LRRC4BQ9NT99 713 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 AK5Q9Y6K8 562 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 A0A088AWK7 358 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 E5RJQ4 531 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 MATN2O00339 956 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 FSCN2O14926 492 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 ADCY6O43306 1168 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 OXSR1O95747 527 aaPredicted RBP22.31■■□□□ 1.16
SDF4-206ENST00000478938 KRT18P05783 430 aaKnown RBP22.31■■□□□ 1.16
SDF4-206ENST00000478938 XIAPP98170 497 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 ZNF200P98182 395 aaPredicted RBP22.31■■□□□ 1.16
SDF4-206ENST00000478938 MYBPC1Q00872 1141 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 EFHC1Q5JVL4 640 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 PASD1Q8IV76 773 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 MARVELD2Q8N4S9 558 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 UBA5Q9GZZ9 404 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 ARMC7Q9H6L4 198 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 PLGRKTQ9HBL7 147 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 TRIM17Q9Y577 477 aa22.31■■□□□ 1.16
SDF4-206ENST00000478938 CPA3P15088 417 aa22.3■■□□□ 1.16
SDF4-206ENST00000478938 IL6STP40189 918 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms