RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 HECAQ9UBI9 543 aaPredicted RBP6.39□□□□□ -1.39
CCDC171-207ENST00000478913 GCC2Q8IWJ2 1684 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 PRR5-ARHGAP8B1AHC4 643 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 CYP27B1O15528 508 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 SNRPA1P09661 255 aaKnown RBP6.38□□□□□ -1.39
CCDC171-207ENST00000478913 PCSK1P29120 753 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 EPHX2P34913 555 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 MTM1Q13496 603 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 GTF2H3Q13889 308 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 MLC1Q15049 377 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 NXNQ6DKJ4 435 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 MAMDC4Q6UXC1 1216 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 GRAMD1CQ8IYS0 662 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 MDGA1Q8NFP4 955 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 HPS3Q969F9 1004 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 MVB12AQ96EY5 273 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 C8orf49Q96NF6 230 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 WWC2-AS2Q96NR7 200 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 ADOQ96SZ5 270 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 LSM14BQ9BX40 385 aaKnown RBP6.38□□□□□ -1.39
CCDC171-207ENST00000478913 KCNH6Q9H252 994 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 RUVBL1Q9Y265 456 aaKnown RBP6.38□□□□□ -1.39
CCDC171-207ENST00000478913 PCDHB1Q9Y5F3 818 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 ACTL7AQ9Y615 435 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 ATRNL1Q5VV63 1379 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 CDC42BPGQ6DT37 1551 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 COL18A1P39060 1754 aa6.38□□□□□ -1.39
CCDC171-207ENST00000478913 ACEP12821 1306 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 CXorf49A8MYA2 514 aaPredicted RBP6.37□□□□□ -1.39
CCDC171-207ENST00000478913 PJA2O43164 708 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 PRPF3O43395 683 aaKnown RBP6.37□□□□□ -1.39
CCDC171-207ENST00000478913 AP1G1O43747 822 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 CELF2O95319 508 aaKnown RBP6.37□□□□□ -1.39
CCDC171-207ENST00000478913 HIBADHP31937 336 aaKnown RBP6.37□□□□□ -1.39
CCDC171-207ENST00000478913 ZNF267Q14586 743 aaPredicted RBP6.37□□□□□ -1.39
CCDC171-207ENST00000478913 RAB39AQ14964 217 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 ATP2B3Q16720 1220 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 THEMIS2Q5TEJ8 643 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 ANKS6Q68DC2 871 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 GADL1Q6ZQY3 521 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 Q6ZSN1 163 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 EPM2AIP1Q7L775 607 aaPredicted RBP6.37□□□□□ -1.39
CCDC171-207ENST00000478913 GSPT2Q8IYD1 628 aaKnown RBP6.37□□□□□ -1.39
CCDC171-207ENST00000478913 MAGEB6Q8N7X4 407 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 NSUN6Q8TEA1 469 aaKnown RBP6.37□□□□□ -1.39
CCDC171-207ENST00000478913 ATXN2LQ8WWM7 1075 aaKnown RBP6.37□□□□□ -1.39
CCDC171-207ENST00000478913 EDAQ92838 391 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 CLPTM1LQ96KA5 538 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 MRI1Q9BV20 369 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 SLC12A5Q9H2X9 1139 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 STK26Q9P289 416 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 CHPF2Q9P2E5 772 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 HACL1Q9UJ83 578 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 CLCA2Q9UQC9 943 aa6.37□□□□□ -1.39
CCDC171-207ENST00000478913 GPRASP1Q5JY77 1395 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 TBKBP1A7MCY6 615 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 WNT10BO00744 389 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 ATP5JP18859 108 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 HK1P19367 917 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 LPOP22079 712 aaPredicted RBP6.36□□□□□ -1.39
CCDC171-207ENST00000478913 CLRN1P58418 232 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 ATP8B2P98198 1209 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 DSC2Q02487 901 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 NHLH1Q02575 133 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 CREMQ03060 361 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 CRHR2Q13324 411 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 PRKD1Q15139 912 aaPredicted RBP6.36□□□□□ -1.39
CCDC171-207ENST00000478913 MINDY4Q4G0A6 757 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 DCAF17Q5H9S7 520 aaPredicted RBP6.36□□□□□ -1.39
CCDC171-207ENST00000478913 TMEM31Q5JXX7 168 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 ATAT1Q5SQI0 421 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 SPTY2D1Q68D10 685 aaPredicted RBP6.36□□□□□ -1.39
CCDC171-207ENST00000478913 SLC35B2Q8TB61 432 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 IFI44Q8TCB0 444 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 TFAP2CQ92754 450 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 RGMAQ96B86 450 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 KLC2Q9H0B6 622 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 ANLNQ9NQW6 1124 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 BDP1A6H8Y1 2624 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 PIK3C2AO00443 1686 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 KIF1AQ12756 1690 aa6.36□□□□□ -1.39
CCDC171-207ENST00000478913 SBF1O95248 1867 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 GOLGA6CA6NDK9 693 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 GOLGA6BA6NDN3 693 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 MUSKO15146 869 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 FTLP02792 175 aaPredicted RBP6.35□□□□□ -1.39
CCDC171-207ENST00000478913 GOLGA6DP0CG33 693 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 MAGEA10P43363 369 aaPredicted RBP6.35□□□□□ -1.39
CCDC171-207ENST00000478913 CTXN1P60606 82 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 RAP2BP61225 183 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 BMT2Q1RMZ1 405 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 METTL24Q5JXM2 366 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 OTUD7BQ6GQQ9 843 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 SEM1Q6ZVN7 128 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 PLXDC1Q8IUK5 500 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 LURAP1LQ8IV03 231 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 CAMKK1Q8N5S9 505 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 OR52N2Q8NGI0 321 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 ZFP28Q8NHY6 868 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 DIS3LQ8TF46 1054 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms