RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 PTPROQ16827 1216 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 ARHGAP44Q17R89 818 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 SGSM1Q2NKQ1 1148 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 CACNA2D4Q7Z3S7 1137 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 KAT5Q92993 513 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 ZNF560Q96MR9 790 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 NUP58Q9BVL2 599 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 MRPL9Q9BYD2 267 aaKnown RBP12.54□□□□□ -0.4
PDCD11-204ENST00000478543 TTYH3Q9C0H2 523 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 XYLT2Q9H1B5 865 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 UBE2TQ9NPD8 197 aaPredicted RBP12.54□□□□□ -0.4
PDCD11-204ENST00000478543 CEP72Q9P209 647 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 KANSL3Q9P2N6 904 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 NXF1Q9UBU9 619 aaKnown RBP12.54□□□□□ -0.4
PDCD11-204ENST00000478543 DNAJB4Q9UDY4 337 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 PIRO00625 290 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 GRM6O15303 877 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 ZC3H11AO75152 810 aaKnown RBP eCLIP12.53□□□□□ -0.4
PDCD11-204ENST00000478543 PTMAP06454 111 aaKnown RBP12.53□□□□□ -0.4
PDCD11-204ENST00000478543 UCHL3P15374 230 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 ATICP31939 592 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 OR1G1P47890 313 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 TAF6P49848 677 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 DSC1Q08554 894 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 MYO1EQ12965 1108 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 TRIM14Q14142 442 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 WDR72Q3MJ13 1102 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 ZNF667Q5HYK9 610 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 ASCL5Q7RTU5 278 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 COLGALT2Q8IYK4 626 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 LRRC43Q8N309 656 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 LRRC52Q8N7C0 313 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 HASPINQ8TF76 798 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 TAF4BQ92750 862 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 PDLIM2Q96JY6 352 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 YME1L1Q96TA2 773 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 ARID3AQ99856 593 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 NIF3L1Q9GZT8 377 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 NRDE2Q9H7Z3 1164 aa12.53□□□□□ -0.4
PDCD11-204ENST00000478543 PRG3Q9Y2Y8 225 aaPredicted RBP12.53□□□□□ -0.4
PDCD11-204ENST00000478543 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.53□□□□□ -0.4
PDCD11-204ENST00000478543 FNDC1Q4ZHG4 1894 aaPredicted RBP12.53□□□□□ -0.4
PDCD11-204ENST00000478543 AKR1B15C9JRZ8 316 aaPredicted RBP12.52□□□□□ -0.41
PDCD11-204ENST00000478543 F8W810 466 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 SPTLC1O15269 473 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 MFAP3LO75121 409 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 CSPG5O95196 566 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 PNMA6AP0CW24 399 aaPredicted RBP12.52□□□□□ -0.41
PDCD11-204ENST00000478543 RPL9P32969 192 aaKnown RBP12.52□□□□□ -0.41
PDCD11-204ENST00000478543 PBX3P40426 434 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 RAP1GAPP47736 663 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 MFAP3P55082 362 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 ADKP55263 362 aaKnown RBP12.52□□□□□ -0.41
PDCD11-204ENST00000478543 TNNC1P63316 161 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 CUL2Q13617 745 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 CAMK1Q14012 370 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 BTG3Q14201 252 aaPredicted RBP12.52□□□□□ -0.41
PDCD11-204ENST00000478543 ARID5BQ14865 1188 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 UPP1Q16831 310 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 SV2CQ496J9 727 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 FIGNQ5HY92 759 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 SPOUT1Q5T280 376 aaKnown RBP12.52□□□□□ -0.41
PDCD11-204ENST00000478543 PDXDC1Q6P996 788 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 CCDC186Q7Z3E2 898 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 FBXL6Q8N531 539 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 C3orf58Q8NDZ4 430 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 ZNF689Q96CS4 500 aaPredicted RBP12.52□□□□□ -0.41
PDCD11-204ENST00000478543 DDX27Q96GQ7 796 aaKnown RBP12.52□□□□□ -0.41
PDCD11-204ENST00000478543 KREMEN1Q96MU8 473 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 UROC1Q96N76 676 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 SPAG5Q96R06 1193 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 SMYD3Q9H7B4 428 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 IMPACTQ9P2X3 320 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 CAPN11Q9UMQ6 739 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 LUC7L2Q9Y383 392 aaKnown RBP12.52□□□□□ -0.41
PDCD11-204ENST00000478543 SNX9Q9Y5X1 595 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 CACNA1HO95180 2353 aa12.52□□□□□ -0.41
PDCD11-204ENST00000478543 A0A1W2PQJ5 194 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 LRRC53A6NM62 1247 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 I3L4J1 428 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 B3GAT3O94766 335 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 KIF4AO95239 1232 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 STAU1O95793 577 aaKnown RBP12.51□□□□□ -0.41
PDCD11-204ENST00000478543 P4HA1P13674 534 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 CD58P19256 250 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 RFX1P22670 979 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 KRT9P35527 623 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 USP8P40818 1118 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 PNPLA4P41247 253 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 ASPAP45381 313 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 BRCC3P46736 316 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 SLC11A1P49279 550 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 LILRA4P59901 499 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 ZXDAP98168 799 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 SMAD4Q13485 552 aaKnown RBP12.51□□□□□ -0.41
PDCD11-204ENST00000478543 DRAP1Q14919 205 aaPredicted RBP12.51□□□□□ -0.41
PDCD11-204ENST00000478543 CMTR2Q8IYT2 770 aaKnown RBP12.51□□□□□ -0.41
PDCD11-204ENST00000478543 ZNF397Q8NF99 534 aaPredicted RBP12.51□□□□□ -0.41
PDCD11-204ENST00000478543 BAP1Q92560 729 aa12.51□□□□□ -0.41
PDCD11-204ENST00000478543 IQCDQ96DY2 449 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms