RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 CEP85Q6P2H3 762 aa4.42□□□□□ -1.7
HPS3-205ENST00000478525 SLC2A7Q6PXP3 512 aa4.42□□□□□ -1.7
HPS3-205ENST00000478525 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.42□□□□□ -1.7
HPS3-205ENST00000478525 CHAC2Q8WUX2 184 aa4.42□□□□□ -1.7
HPS3-205ENST00000478525 RGMAQ96B86 450 aa4.42□□□□□ -1.7
HPS3-205ENST00000478525 MRGPRX4Q96LA9 322 aa4.42□□□□□ -1.7
HPS3-205ENST00000478525 ACTRT3Q9BYD9 372 aa4.42□□□□□ -1.7
HPS3-205ENST00000478525 SMOC2Q9H3U7 446 aa4.42□□□□□ -1.7
HPS3-205ENST00000478525 SERTAD4Q9NUC0 356 aa4.42□□□□□ -1.7
HPS3-205ENST00000478525 TUBD1Q9UJT1 453 aa4.42□□□□□ -1.7
HPS3-205ENST00000478525 SPATA31A3Q5VYP0 1347 aa4.42□□□□□ -1.7
HPS3-205ENST00000478525 F5H697 171 aa4.41□□□□□ -1.7
HPS3-205ENST00000478525 POLRMTO00411 1230 aaKnown RBP4.41□□□□□ -1.7
HPS3-205ENST00000478525 PPP6CO00743 305 aa4.41□□□□□ -1.7
HPS3-205ENST00000478525 ZNF213O14771 459 aa4.41□□□□□ -1.7
HPS3-205ENST00000478525 GPR39O43194 453 aa4.41□□□□□ -1.7
HPS3-205ENST00000478525 SGTAO43765 313 aa4.41□□□□□ -1.7
HPS3-205ENST00000478525 TLE1Q04724 770 aa4.41□□□□□ -1.7
HPS3-205ENST00000478525 KLHL22Q53GT1 634 aa4.41□□□□□ -1.7
HPS3-205ENST00000478525 PLAC9Q5JTB6 97 aa4.41□□□□□ -1.7
HPS3-205ENST00000478525 PRAMEF17Q5VTA0 474 aa4.41□□□□□ -1.7
HPS3-205ENST00000478525 SLC30A10Q6XR72 485 aa4.41□□□□□ -1.7
HPS3-205ENST00000478525 ZNF517Q6ZMY9 492 aaPredicted RBP4.41□□□□□ -1.7
HPS3-205ENST00000478525 ZNF551Q7Z340 670 aaPredicted RBP4.41□□□□□ -1.7
HPS3-205ENST00000478525 SPATS2Q86XZ4 545 aaKnown RBP4.41□□□□□ -1.7
HPS3-205ENST00000478525 OSBPL9Q96SU4 736 aa4.41□□□□□ -1.7
HPS3-205ENST00000478525 AMBRA1Q9C0C7 1298 aa4.41□□□□□ -1.7
HPS3-205ENST00000478525 SPRTNQ9H040 489 aaPredicted RBP4.41□□□□□ -1.7
HPS3-205ENST00000478525 MRPS18AQ9NVS2 196 aaKnown RBP4.41□□□□□ -1.7
HPS3-205ENST00000478525 ETAA1Q9NY74 926 aa4.41□□□□□ -1.7
HPS3-205ENST00000478525 WASHC2AQ641Q2 1341 aa4.41□□□□□ -1.7
HPS3-205ENST00000478525 SMIM22K7EJ46 135 aa4.4□□□□□ -1.71
HPS3-205ENST00000478525 PPEF2O14830 753 aa4.4□□□□□ -1.71
HPS3-205ENST00000478525 TRIAP1O43715 76 aa4.4□□□□□ -1.71
HPS3-205ENST00000478525 JTBO76095 146 aa4.4□□□□□ -1.71
HPS3-205ENST00000478525 ANXA1P04083 346 aa4.4□□□□□ -1.71
HPS3-205ENST00000478525 FOXG1P55316 489 aaPredicted RBP4.4□□□□□ -1.71
HPS3-205ENST00000478525 BMPR2Q13873 1038 aa4.4□□□□□ -1.71
HPS3-205ENST00000478525 RAB39AQ14964 217 aa4.4□□□□□ -1.71
HPS3-205ENST00000478525 TBCCQ15814 346 aa4.4□□□□□ -1.71
HPS3-205ENST00000478525 CT47A1Q5JQC4 288 aaPredicted RBP4.4□□□□□ -1.71
HPS3-205ENST00000478525 AWAT2Q6E213 333 aa4.4□□□□□ -1.71
HPS3-205ENST00000478525 AOPEPQ8N6M6 819 aa4.4□□□□□ -1.71
HPS3-205ENST00000478525 PSD4Q8NDX1 1056 aa4.4□□□□□ -1.71
HPS3-205ENST00000478525 SSH1Q8WYL5 1049 aa4.4□□□□□ -1.71
HPS3-205ENST00000478525 HDAC10Q969S8 669 aa4.4□□□□□ -1.71
HPS3-205ENST00000478525 ANLNQ9NQW6 1124 aa4.4□□□□□ -1.71
HPS3-205ENST00000478525 ELOVL5Q9NYP7 299 aa4.4□□□□□ -1.71
HPS3-205ENST00000478525 SAP30BPQ9UHR5 308 aaKnown RBP4.4□□□□□ -1.71
HPS3-205ENST00000478525 PCDHB1Q9Y5F3 818 aa4.4□□□□□ -1.71
HPS3-205ENST00000478525 K7ESF4 209 aa4.39□□□□□ -1.71
HPS3-205ENST00000478525 NDUFS2O75306 463 aa4.39□□□□□ -1.71
HPS3-205ENST00000478525 NDUFB7P17568 137 aa4.39□□□□□ -1.71
HPS3-205ENST00000478525 IL10RAQ13651 578 aa4.39□□□□□ -1.71
HPS3-205ENST00000478525 C3orf36Q3SXR2 165 aa4.39□□□□□ -1.71
HPS3-205ENST00000478525 RBM20Q5T481 1227 aaKnown RBP4.39□□□□□ -1.71
HPS3-205ENST00000478525 TAF2Q6P1X5 1199 aa4.39□□□□□ -1.71
HPS3-205ENST00000478525 GADL1Q6ZQY3 521 aa4.39□□□□□ -1.71
HPS3-205ENST00000478525 SLC29A4Q7RTT9 530 aa4.39□□□□□ -1.71
HPS3-205ENST00000478525 AMOTL1Q8IY63 956 aa4.39□□□□□ -1.71
HPS3-205ENST00000478525 KLHDC4Q8TBB5 520 aa4.39□□□□□ -1.71
HPS3-205ENST00000478525 TBC1D5Q92609 795 aa4.39□□□□□ -1.71
HPS3-205ENST00000478525 SERHLQ9NQF3 203 aa4.39□□□□□ -1.71
HPS3-205ENST00000478525 ARHGEF3Q9NR81 526 aa4.39□□□□□ -1.71
HPS3-205ENST00000478525 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.39□□□□□ -1.71
HPS3-205ENST00000478525 TBX22Q9Y458 520 aa4.39□□□□□ -1.71
HPS3-205ENST00000478525 CACNA1IQ9P0X4 2223 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 TRIM75PA6NK02 468 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 H0YIZ8 118 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 NXPH3O95157 252 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 TUBB4AP04350 444 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 PDHA1P08559 390 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 CHRM3P20309 590 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 CCKBRP32239 447 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 PSMC1P62191 440 aaKnown RBP4.38□□□□□ -1.71
HPS3-205ENST00000478525 KLF1Q13351 362 aaPredicted RBP4.38□□□□□ -1.71
HPS3-205ENST00000478525 CLUL1Q15846 466 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 CCDC93Q567U6 631 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 FAM109AQ8N4B1 249 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 WDR66Q8TBY9 1149 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 ATRIPQ8WXE1 791 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 KAT5Q92993 513 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 SCAMP4Q969E2 229 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 DMRTA2Q96SC8 542 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 VPS16Q9H269 839 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 ZNF580Q9UK33 172 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 IPPQ9Y573 584 aa4.38□□□□□ -1.71
HPS3-205ENST00000478525 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.38□□□□□ -1.71
HPS3-205ENST00000478525 ZNF785A8K8V0 405 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 PRRT4C9JH25 899 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 MYO1FO00160 1098 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 F2RL2O00254 374 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 HTRA2O43464 458 aaPredicted RBP4.37□□□□□ -1.71
HPS3-205ENST00000478525 C5AR1P21730 350 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 EDNRBP24530 442 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 ARHGAP25P42331 645 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 MMP13P45452 471 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 VPS53Q5VIR6 699 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 RUSC1-AS1Q66K80 236 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 PDSS2Q86YH6 399 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms