RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 DPP6P42658 865 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 ATXN3P54252 364 aaPredicted RBP8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 EPHB3P54753 998 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 GFPT1Q06210 699 aaPredicted RBP8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 DUSP4Q13115 394 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 SLC14A1Q13336 389 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 PLD1Q13393 1074 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 CTTNQ14247 550 aaKnown RBP8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 DUOXA1Q1HG43 343 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 TTC22Q5TAA0 569 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 EEF1DP3Q658K8 133 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 CREB3L3Q68CJ9 461 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 CDCA2Q69YH5 1023 aaPredicted RBP8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 ANO7Q6IWH7 933 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 ZNF280DQ6N043 979 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 TOGARAM2Q6ZUX3 1019 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 ARMCX6Q7L4S7 300 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 TMPRSS7Q7RTY8 843 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 GLRX5Q86SX6 157 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 MINDY1Q8N5J2 469 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 FRMD1Q8N878 549 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 OR2I1PQ8NGU4 316 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 CEP76Q8TAP6 659 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 USP33Q8TEY7 942 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 DDX12PQ92771 950 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 PSMG2Q969U7 264 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 DYDC2Q96IM9 177 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 TCEANC2Q96MN5 208 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 GTPBP2Q9BX10 602 aaKnown RBP8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 LSG1Q9H089 658 aaKnown RBP8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 SLKQ9H2G2 1235 aaPredicted RBP8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 KDM4CQ9H3R0 1056 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 PRORYQ9H606 182 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 IL21Q9HBE4 155 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 KCNMB3Q9NPA1 279 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 DDX25Q9UHL0 483 aaKnown RBP8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 DACH1Q9UI36 760 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 CCL26Q9Y258 94 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 USP20Q9Y2K6 914 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 ASB3Q9Y575 518 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 KLF18A0A0U1RQI7 1052 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 ANTXRLA6NF34 631 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 TRABD2BA6NFA1 517 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 ACKR2O00590 384 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 ARHGAP33O14559 1287 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 CBFA2T3O75081 653 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 LYPLA2O95372 231 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 FGF19O95750 216 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 CFIP05156 583 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 EDN1P05305 212 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 OR4Q2P0C623 313 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 HNRNPLP14866 589 aaKnown RBP eCLIP8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 CPB1P15086 417 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 ITPKAP23677 461 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 RPL9P32969 192 aaKnown RBP8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 ALDH1A3P47895 512 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 CYP4A11Q02928 519 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 GPR17Q13304 367 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 PRPF4BQ13523 1007 aaKnown RBP8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 CAMK2BQ13554 666 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 CRY1Q16526 586 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 MAP7D1Q3KQU3 841 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 ARHGAP15Q53QZ3 475 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 LYSMD4Q5XG99 296 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 CENPPQ6IPU0 288 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 TPH2Q8IWU9 490 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 CMTM8Q8IZV2 173 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 APPL2Q8NEU8 664 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 CCDC148Q8NFR7 591 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 RIN3Q8TB24 985 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 HAS1Q92839 578 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 SUSD3Q96L08 255 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 ZMAT2Q96NC0 199 aaKnown RBP8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 TBC1D32Q96NH3 1257 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 PGLYRP2Q96PD5 576 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 HSD17B14Q9BPX1 270 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 ADPGKQ9BRR6 497 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 C22orf23Q9BZE7 217 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 POLR3FQ9H1D9 316 aaPredicted RBP8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 RWDD1Q9H446 243 aaPredicted RBP8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 ANKEF1Q9NU02 776 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 VPS54Q9P1Q0 977 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 SLC27A5Q9Y2P5 690 aa8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 TDRD15B5MCY1 1934 aaKnown RBP8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 ATXN2Q99700 1313 aaKnown RBP8.03□□□□□ -1.12
SPTLC1-205ENST00000477888 EML5Q05BV3 1969 aa8.02□□□□□ -1.12
SPTLC1-205ENST00000477888 CCDC196A0A1B0GTZ2 297 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 LRRIQ4A6NIV6 560 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 K7EQS6 105 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 MAP3K13O43283 966 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 DKK1O94907 266 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 ABCG1P45844 678 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 RARRES1P49788 294 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 CYP4F8P98187 520 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 SRSF1Q07955 248 aaKnown RBP eCLIP8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 PSMD2Q13200 908 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 NTRK3Q16288 839 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 PCSK4Q6UW60 755 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 TMEM92Q6UXU6 159 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 DHX32Q7L7V1 743 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms