RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 ALOX15BO15296 676 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 ATP5HO75947 161 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 GH1P01241 217 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 CFHP08603 1231 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 WNT7BP56706 349 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 PIGHQ14442 188 aaPredicted RBP19.11■□□□□ 0.65
CCM2-209ENST00000477605 SNRNP48Q6IEG0 339 aaKnown RBP19.11■□□□□ 0.65
CCM2-209ENST00000477605 ASRGL1Q7L266 308 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 ZNF606Q8WXB4 792 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 C12orf42Q96LP6 360 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 PITPNM3Q9BZ71 974 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 SAYSD1Q9NPB0 183 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 FETUBQ9UGM5 382 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 TBK1Q9UHD2 729 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 SLC24A2Q9UI40 661 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 SHOC2Q9UQ13 582 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 ZNF148Q9UQR1 794 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 EFR3BQ9Y2G0 817 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 NUB1Q9Y5A7 615 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 ZNF541Q9H0D2 1346 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 ASMTLO95671 621 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 KRT1P04264 644 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 ITGAVP06756 1048 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 CCNB1P14635 433 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 GLRA2P23416 452 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 RFC5P40937 340 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 ZNF280AP59817 542 aaPredicted RBP19.1■□□□□ 0.65
CCM2-209ENST00000477605 DGKZQ13574 1117 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 NCOA4Q13772 614 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 CIAPIN1Q6FI81 312 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 SPOCD1Q6ZMY3 1216 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 PCGF5Q86SE9 256 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 FITM2Q8N6M3 262 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 NIPA2Q8N8Q9 360 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 DENND1AQ8TEH3 1009 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 NIFKQ9BYG3 293 aaKnown RBP19.1■□□□□ 0.65
CCM2-209ENST00000477605 HAPLN2Q9GZV7 340 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 EBF2Q9HAK2 575 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 TCRBV5S1A1TA0A578 114 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 OATP04181 439 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 ICAM3P32942 547 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 VCPP55072 806 aaKnown RBP19.1■□□□□ 0.65
CCM2-209ENST00000477605 SPARCL1Q14515 664 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 TMED2Q15363 201 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 TMEM35BQ8NCS4 154 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 ASAP3Q8TDY4 903 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 CXorf56Q9H5V9 222 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 SSU72Q9NP77 194 aaKnown RBP19.1■□□□□ 0.65
CCM2-209ENST00000477605 NMRK2Q9NPI5 230 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 DNPEPQ9ULA0 475 aa19.1■□□□□ 0.65
CCM2-209ENST00000477605 IGF2BP3O00425 579 aaKnown RBP eCLIP19.09■□□□□ 0.65
CCM2-209ENST00000477605 ARSEP51690 589 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 SF3A3Q12874 501 aaKnown RBP eCLIP19.09■□□□□ 0.65
CCM2-209ENST00000477605 ZC3H12AQ5D1E8 599 aaKnown RBP19.09■□□□□ 0.65
CCM2-209ENST00000477605 DAB2IPQ5VWQ8 1189 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 CGB2Q6NT52 195 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 CYP4F22Q6NT55 531 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 MFSD7Q6UXD7 560 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 ZPBP2Q6X784 338 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 CENPUQ71F23 418 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 FBF1Q8TES7 1133 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 SLC7A3Q8WY07 619 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 FAM84AQ96KN4 292 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 PCDH9Q9HC56 1237 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 MLXIPLQ9NP71 852 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 ZNF302Q9NR11 478 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 CYP39A1Q9NYL5 469 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 DICER1Q9UPY3 1922 aaKnown RBP19.09■□□□□ 0.65
CCM2-209ENST00000477605 ARID2Q68CP9 1835 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 ASS1P00966 412 aaKnown RBP19.09■□□□□ 0.65
CCM2-209ENST00000477605 CCND1P24385 295 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 GCAP28676 217 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 FOXN2P32314 431 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 CDH5P33151 784 aaPredicted RBP19.09■□□□□ 0.65
CCM2-209ENST00000477605 WDR4P57081 412 aaKnown RBP19.09■□□□□ 0.65
CCM2-209ENST00000477605 KCNJ2P63252 427 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 OASLQ15646 514 aaKnown RBP19.09■□□□□ 0.65
CCM2-209ENST00000477605 TFDP3Q5H9I0 405 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 DCAF15Q66K64 600 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 DNAJC24Q6P3W2 148 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 WDR49Q8IV35 697 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 PLCD3Q8N3E9 789 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 ACAD9Q9H845 621 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 TXLNGQ9NUQ3 528 aa19.09■□□□□ 0.65
CCM2-209ENST00000477605 ZNF214Q9UL59 606 aaPredicted RBP19.09■□□□□ 0.65
CCM2-209ENST00000477605 hCG_1818297A0A087WSY0 165 aa19.08■□□□□ 0.64
CCM2-209ENST00000477605 LRRIQ4A6NIV6 560 aa19.08■□□□□ 0.64
CCM2-209ENST00000477605 EIF4BP23588 611 aaKnown RBP19.08■□□□□ 0.64
CCM2-209ENST00000477605 ELF1P32519 619 aa19.08■□□□□ 0.64
CCM2-209ENST00000477605 GJC1P36383 396 aa19.08■□□□□ 0.64
CCM2-209ENST00000477605 ALDH5A1P51649 535 aaPredicted RBP19.08■□□□□ 0.64
CCM2-209ENST00000477605 SURF1Q15526 300 aa19.08■□□□□ 0.64
CCM2-209ENST00000477605 SPDYAQ5MJ70 313 aa19.08■□□□□ 0.64
CCM2-209ENST00000477605 RNASEH2BQ5TBB1 312 aaKnown RBP19.08■□□□□ 0.64
CCM2-209ENST00000477605 POLNQ7Z5Q5 900 aa19.08■□□□□ 0.64
CCM2-209ENST00000477605 BRSK2Q8IWQ3 736 aa19.08■□□□□ 0.64
CCM2-209ENST00000477605 SCYL3Q8IZE3 742 aa19.08■□□□□ 0.64
CCM2-209ENST00000477605 ZNF280CQ8ND82 737 aa19.08■□□□□ 0.64
CCM2-209ENST00000477605 TMEM143Q96AN5 459 aa19.08■□□□□ 0.64
CCM2-209ENST00000477605 SMC6Q96SB8 1091 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms