RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 AGO2Q9UKV8 859 aaKnown RBP12.3□□□□□ -0.44
HDLBP-236ENST00000477477 DSEQ9UL01 958 aa12.3□□□□□ -0.44
HDLBP-236ENST00000477477 CLIC4Q9Y696 253 aa12.3□□□□□ -0.44
HDLBP-236ENST00000477477 CHADO15335 359 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 PPP1R37O75864 691 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 TDGF1P13385 188 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 CCNE1P24864 410 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 GABRR2P28476 465 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 TAF6P49848 677 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 MLLT6P55198 1093 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-236ENST00000477477 CRELD2Q6UXH1 353 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-236ENST00000477477 MAMSTRQ6ZN01 415 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 DYMQ7RTS9 669 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 ZNF720Q7Z2F6 126 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 ITIH5Q86UX2 942 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 ARID3BQ8IVW6 561 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-236ENST00000477477 YAF2Q8IY57 180 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 EFCAB13Q8IY85 973 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 MSANTD3Q96H12 275 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 SEPT5Q99719 369 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-236ENST00000477477 PYM1Q9BRP8 204 aaKnown RBP12.29□□□□□ -0.44
HDLBP-236ENST00000477477 FAM126AQ9BYI3 521 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-236ENST00000477477 IKZF4Q9H2S9 585 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 ATXN3LQ9H3M9 355 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 LMAN1LQ9HAT1 526 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 DPP3Q9NY33 737 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 NCDNQ9UBB6 729 aa12.29□□□□□ -0.44
HDLBP-236ENST00000477477 FBXO2Q9UK22 296 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-236ENST00000477477 SMG5Q9UPR3 1016 aaKnown RBP12.29□□□□□ -0.44
HDLBP-236ENST00000477477 TSC2P49815 1807 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 CYB561D2O14569 222 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 CHRNB1P11230 501 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 ATF6P18850 670 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 PDCP20941 246 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 ADSSP30520 456 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 TUFMP49411 452 aaKnown RBP12.28□□□□□ -0.44
HDLBP-236ENST00000477477 CCR3P51677 355 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 RESTQ13127 1097 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 VEPH1Q14D04 833 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 POSTNQ15063 836 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 MGAT5BQ3V5L5 792 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 SLC39A12Q504Y0 691 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 ARHGAP15Q53QZ3 475 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 GPR158Q5T848 1215 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 C1orf228Q6PIY5 440 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 METTL23Q86XA0 190 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 CSGALNACT1Q8TDX6 532 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 POMGNT1Q8WZA1 660 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 LPIN3Q9BQK8 851 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 STRA6Q9BX79 667 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 C8orf33Q9H7E9 229 aaPredicted RBP12.28□□□□□ -0.44
HDLBP-236ENST00000477477 OBP2AQ9NY56 170 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 SEL1LQ9UBV2 794 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 CCDC39Q9UFE4 941 aa12.28□□□□□ -0.44
HDLBP-236ENST00000477477 SRPRBQ9Y5M8 271 aaKnown RBP12.28□□□□□ -0.44
HDLBP-236ENST00000477477 CEP250Q9BV73 2442 aa12.27□□□□□ -0.44
HDLBP-236ENST00000477477 MYMKA6NI61 221 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 SLC38A8A6NNN8 435 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 DPYSL4O14531 572 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 IL18RAPO95256 599 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 PRAMEF12O95522 483 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 GAP43P17677 238 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 WEE1P30291 646 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 CDC25CP30307 473 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 TXLNAP40222 546 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 SOX9P48436 509 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 KPNA1P52294 538 aaPredicted RBP12.27□□□□□ -0.45
HDLBP-236ENST00000477477 CYP4F8P98187 520 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 KCNA1Q09470 495 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 SMARCB1Q12824 385 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 PUM1Q14671 1186 aaKnown RBP eCLIP12.27□□□□□ -0.45
HDLBP-236ENST00000477477 PPP2R5DQ14738 602 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 SV2CQ496J9 727 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 L1TD1Q5T7N2 865 aaKnown RBP12.27□□□□□ -0.45
HDLBP-236ENST00000477477 RRAGBQ5VZM2 374 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 WSCD1Q658N2 575 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 NT5DC4Q86YG4 428 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 GPIHBP1Q8IV16 184 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 THEM5Q8N1Q8 247 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 FAM200AQ8TCP9 573 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 SPPL2BQ8TCT7 592 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 C2orf15Q8WU43 125 aaKnown RBP12.27□□□□□ -0.45
HDLBP-236ENST00000477477 DNAJC19Q96DA6 116 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 ZNF560Q96MR9 790 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 LRRC3BQ96PB8 259 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 MRPL44Q9H9J2 332 aaKnown RBP12.27□□□□□ -0.45
HDLBP-236ENST00000477477 IL21Q9HBE4 155 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 EXOC7Q9UPT5 735 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 DNAH14Q0VDD8 3507 aa12.27□□□□□ -0.45
HDLBP-236ENST00000477477 MYBPHLA2RUH7 354 aa12.26□□□□□ -0.45
HDLBP-236ENST00000477477 KPNA7A9QM74 516 aa12.26□□□□□ -0.45
HDLBP-236ENST00000477477 SPECC1L-ADORA2AF8WAN1 911 aa12.26□□□□□ -0.45
HDLBP-236ENST00000477477 GCNT3O95395 438 aa12.26□□□□□ -0.45
HDLBP-236ENST00000477477 HAPLN1P10915 354 aaPredicted RBP12.26□□□□□ -0.45
HDLBP-236ENST00000477477 CTHP32929 405 aa12.26□□□□□ -0.45
HDLBP-236ENST00000477477 PNPLA4P41247 253 aa12.26□□□□□ -0.45
HDLBP-236ENST00000477477 CDR1P51861 262 aa12.26□□□□□ -0.45
HDLBP-236ENST00000477477 NRLP54845 237 aa12.26□□□□□ -0.45
HDLBP-236ENST00000477477 WNT7BP56706 349 aa12.26□□□□□ -0.45
HDLBP-236ENST00000477477 LRRC32Q14392 662 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms