RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 CPB1P15086 417 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 CCNE1P24864 410 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 SSTR3P32745 418 aaPredicted RBP13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 TUFMP49411 452 aaKnown RBP13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 MYL7Q01449 175 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 MORC3Q14149 939 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 KLHL40Q2TBA0 621 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 ZACNQ401N2 412 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 TDRD5Q8NAT2 981 aaKnown RBP13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 SPPL2BQ8TCT7 592 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 NOC3LQ8WTT2 800 aaKnown RBP13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 CLSTN2Q9H4D0 955 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 PIDD1Q9HB75 910 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 KIAA1468Q9P260 1216 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 EPS15L1Q9UBC2 864 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 INSL5Q9Y5Q6 135 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 CLUHO75153 1309 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 BICDL2A1A5D9 508 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 LRRIQ3A6PVS8 624 aaPredicted RBP13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 AKAP3O75969 853 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 LRG1P02750 347 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 KRT19P08727 400 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 SPATA31D3P0C874 917 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 P4HA1P13674 534 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 PRKCSHP14314 528 aaPredicted RBP13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 VAMP7P51809 220 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 EPHA5P54756 1037 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 TSPY1Q01534 308 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 ADCY1Q08828 1119 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 BFSP1Q12934 665 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 TRPC3Q13507 836 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 NFKBIBQ15653 356 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 MAPRE1Q15691 268 aaKnown RBP13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 SGSM1Q2NKQ1 1148 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 WSCD1Q658N2 575 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 RBM43Q6ZSC3 357 aaKnown RBP13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 SPATA31D4Q6ZUB0 917 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 GLYCTKQ8IVS8 523 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 FAM186BQ8IYM0 893 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 ELMOD1Q8N336 334 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 PDCL2Q8N4E4 241 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 ZNF516Q92618 1163 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 FUBP3Q96I24 572 aaKnown RBP eCLIP13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 CEP63Q96MT8 703 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 NECAB3Q96P71 396 aaPredicted RBP13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 RTP3Q9BQQ7 232 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 C1QTNF1Q9BXJ1 281 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 XYLT2Q9H1B5 865 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 CYP4F11Q9HBI6 524 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 METTL14Q9HCE5 456 aaKnown RBP13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 CD320Q9NPF0 282 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 IGSF9Q9P2J2 1179 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 MAN1B1Q9UKM7 699 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 L1RE1Q9UN81 338 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 SNX9Q9Y5X1 595 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 MUC3AQ02505 3323 aa13.27□□□□□ -0.29
CLCNKA-205ENST00000477360 ZNF197O14709 1029 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 PMM2O15305 246 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 DCXO43602 365 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 FGF19O95750 216 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 EPB41P11171 864 aaKnown RBP13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 PTPN2P17706 415 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 WARSP23381 471 aaKnown RBP13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 CASP4P49662 377 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 PLXNA3P51805 1871 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 NCOA4Q13772 614 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 SOWAHAQ2M3V2 549 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 CFAP221Q4G0U5 840 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 CT47A1Q5JQC4 288 aaPredicted RBP13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 CEP135Q66GS9 1140 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 SMYD5Q6GMV2 418 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 IQCEQ6IPM2 695 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 RNF135Q8IUD6 432 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 UBALD2Q8IYN6 164 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 ADGRF2Q8IZF7 708 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 TTC39CQ8N584 583 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 OR10T2Q8NGX3 314 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 PLEKHO2Q8TD55 490 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 RPGRIP1Q96KN7 1286 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 APOL5Q9BWW9 433 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 NUP62CLQ9H1M0 184 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 GDE1Q9NZC3 331 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 ZMYM5Q9UJ78 669 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 MAPK8IP1Q9UQF2 711 aa13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 TIMM13Q9Y5L4 95 aaPredicted RBP13.26□□□□□ -0.29
CLCNKA-205ENST00000477360 MTMR11A4FU01 709 aa13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 SOBPA7XYQ1 873 aa13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 PHACTR2O75167 634 aa13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 SEC24AO95486 1093 aa13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 GNA14O95837 355 aa13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 CST3P01034 146 aaPredicted RBP13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 TNNC1P63316 161 aa13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 C1orf220Q5T0J3 134 aa13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 TDRD10Q5VZ19 366 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 RNF19BQ6ZMZ0 732 aa13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 SV2AQ7L0J3 742 aa13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 FRMD5Q7Z6J6 570 aa13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 ITIH5Q86UX2 942 aa13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 SMYD4Q8IYR2 804 aaPredicted RBP13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 MLKLQ8NB16 471 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms