RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 SDHBP21912 280 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 RPA1P27694 616 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 MCM7P33993 719 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 TRAPPC10P48553 1259 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 HMGN5P82970 282 aaKnown RBP7.97□□□□□ -1.13
BRCA1-214ENST00000477152 GRM2Q14416 872 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 CDCA2Q69YH5 1023 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-214ENST00000477152 CWF19L1Q69YN2 538 aaKnown RBP7.97□□□□□ -1.13
BRCA1-214ENST00000477152 ANKS3Q6ZW76 656 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 TAS1R1Q7RTX1 841 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 FRMD5Q7Z6J6 570 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 ADSSL1Q8N142 457 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 FAM184AQ8NB25 1140 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 PIGOQ8TEQ8 1089 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 C8orf76Q96K31 380 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 MTMR9Q96QG7 549 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 HHIPQ96QV1 700 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 CCDC94Q9BW85 323 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-214ENST00000477152 FZD8Q9H461 694 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 TBC1D17Q9HA65 648 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 ARHGEF3Q9NR81 526 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 SALL4Q9UJQ4 1053 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 CDH7Q9ULB5 785 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 CA14Q9ULX7 337 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 MRPS17Q9Y2R5 130 aaKnown RBP7.97□□□□□ -1.13
BRCA1-214ENST00000477152 H7C4K7 107 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 K7ERI5 159 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 B4GALT3O60512 393 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 RFPL2O75678 378 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 EFEMP2O95967 443 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 C8AP07357 584 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 ID4P47928 161 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 AFF1P51825 1210 aaKnown RBP7.96□□□□□ -1.14
BRCA1-214ENST00000477152 NEK4P51957 841 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 PPP2R5DQ14738 602 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 LILRA6Q6PI73 481 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 MAEAQ7L5Y9 396 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 ELMOD1Q8N336 334 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 GPR161Q8N6U8 529 aaKnown RBP7.96□□□□□ -1.14
BRCA1-214ENST00000477152 ZSCAN31Q96LW9 406 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-214ENST00000477152 LLPHQ9BRT6 129 aaKnown RBP7.96□□□□□ -1.14
BRCA1-214ENST00000477152 GPR62Q9BZJ7 368 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 FOXP1Q9H334 677 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-214ENST00000477152 C12orf49Q9H741 205 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 MIOSQ9NXC5 875 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 FBXW11Q9UKB1 542 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 MAFFQ9ULX9 164 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 MIA3Q5JRA6 1907 aa7.96□□□□□ -1.14
BRCA1-214ENST00000477152 A0A1W2PP55 124 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 ANHXE9PGG2 379 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 TMEM189-UBE2V1I3L0A0 370 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 J3QW42 95 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 ZNF197O14709 1029 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 SCAMP3O14828 347 aaKnown RBP7.95□□□□□ -1.14
BRCA1-214ENST00000477152 LRG1P02750 347 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 SPATA31D3P0C874 917 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 LIG1P18858 919 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 FANCCQ00597 558 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 ERICH6BQ5W0A0 696 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 SPATA31D4Q6ZUB0 917 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 ASCL5Q7RTU5 278 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 CATSPER3Q86XQ3 398 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 NSUN7Q8NE18 718 aaKnown RBP7.95□□□□□ -1.14
BRCA1-214ENST00000477152 TNFRSF25Q93038 417 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 MYADMQ96S97 322 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 TIPINQ9BVW5 301 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 OSBPL6Q9BZF3 934 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 SMOC2Q9H3U7 446 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 C17orf75Q9HAS0 396 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 SNTG2Q9NY99 539 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 CASTOR2A6NHX0 329 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 H0YCG3 227 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 LAD1O00515 517 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 B4GALT5O43286 388 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 KINO60870 393 aaKnown RBP7.95□□□□□ -1.14
BRCA1-214ENST00000477152 RECQL4O94761 1208 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 B3GAT3O94766 335 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 CTDNEP1O95476 244 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 CCT6AP40227 531 aaKnown RBP7.95□□□□□ -1.14
BRCA1-214ENST00000477152 PCBP4P57723 403 aaKnown RBP7.95□□□□□ -1.14
BRCA1-214ENST00000477152 STARD6P59095 220 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 DMP1Q13316 513 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-214ENST00000477152 HTR4Q13639 388 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 RAB33AQ14088 237 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 PDIA5Q14554 519 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 ME3Q16798 604 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 AXDND1Q5T1B0 1012 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-214ENST00000477152 ATF7IP2Q5U623 682 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 GRASPQ7Z6J2 395 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-214ENST00000477152 C1orf210Q8IVY1 113 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 NECAB1Q8N987 351 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 LNX1Q8TBB1 728 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-214ENST00000477152 ZNF707Q96C28 371 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-214ENST00000477152 DRC1Q96MC2 740 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 CNTNAP3BQ96NU0 1288 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 OXCT2Q9BYC2 517 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-214ENST00000477152 MRPL4Q9BYD3 311 aaKnown RBP7.95□□□□□ -1.14
BRCA1-214ENST00000477152 CNTNAP3Q9BZ76 1288 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 PDZD7Q9H5P4 517 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 GJB4Q9NTQ9 266 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms