RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 S100A1P23297 94 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 NAPAP54920 295 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 NCKAP1LP55160 1127 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 ARL4CP56559 192 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 CREB5Q02930 508 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 SNAPC2Q13487 334 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 APOFQ13790 326 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 SLC2A7Q6PXP3 512 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 CENPUQ71F23 418 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 PTF1AQ7RTS3 328 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 ZCCHC9Q8N567 271 aaKnown RBP14.54□□□□□ -0.08
HDAC1-206ENST00000476391 PNMA1Q8ND90 353 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 CASP10Q92851 521 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 MAK16Q9BXY0 300 aaKnown RBP14.54□□□□□ -0.08
HDAC1-206ENST00000476391 SEPT11Q9NVA2 429 aaKnown RBP14.54□□□□□ -0.08
HDAC1-206ENST00000476391 ARMCX1Q9P291 453 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 MAD2L2Q9UI95 211 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 DNAJC12Q9UKB3 198 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 CEPT1Q9Y6K0 416 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 PDXKO00764 312 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 SPOPO43791 374 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 AKAP3O75969 853 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 ENO1P06733 434 aaKnown RBP14.54□□□□□ -0.08
HDAC1-206ENST00000476391 PDGFRBP09619 1106 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 MYL2P10916 166 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 RRM1P23921 792 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 TMED10P49755 219 aaKnown RBP14.54□□□□□ -0.08
HDAC1-206ENST00000476391 CCR3P51677 355 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 NEK2P51955 445 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 TLR1Q15399 786 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 KNOP1Q1ED39 458 aaKnown RBP14.54□□□□□ -0.08
HDAC1-206ENST00000476391 ZNF423Q2M1K9 1284 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 FBXO27Q8NI29 283 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 PYROXD1Q8WU10 500 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 PYDC1Q8WXC3 89 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 ALKBH8Q96BT7 664 aaKnown RBP14.54□□□□□ -0.08
HDAC1-206ENST00000476391 ARPC5LQ9BPX5 153 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 LRRC4BQ9NT99 713 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 PSMC3IPQ9P2W1 217 aaPredicted RBP14.54□□□□□ -0.08
HDAC1-206ENST00000476391 RSL24D1Q9UHA3 163 aaKnown RBP14.54□□□□□ -0.08
HDAC1-206ENST00000476391 LRP5O75197 1615 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 A0A1B0GUL6 1792 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 A0A1W2PPM1 405 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 SMCO2A6NFE2 343 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 TSPY2A6NKD2 308 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 TTLL13PA6NNM8 815 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 USP17L12C9JPN9 530 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 USP17L21D6R901 530 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 CLDN3O15551 220 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 PMLP29590 882 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 STIP1P31948 543 aaKnown RBP14.53□□□□□ -0.08
HDAC1-206ENST00000476391 ERFP50548 548 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 HIC1Q14526 733 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 INAQ16352 499 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 HYIQ5T013 277 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 NEPROQ6NW34 567 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 POTEHQ6S545 545 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 PALB2Q86YC2 1186 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 GPR88Q9GZN0 384 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 CHST7Q9NS84 486 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 KDM3AQ9Y4C1 1321 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 ADAMTSL3P82987 1691 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.53□□□□□ -0.08
HDAC1-206ENST00000476391 FUOMA2VDF0 154 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 WDR91A4D1P6 747 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 ATMINO43313 823 aaPredicted RBP14.53□□□□□ -0.08
HDAC1-206ENST00000476391 FTLP02792 175 aaPredicted RBP14.53□□□□□ -0.08
HDAC1-206ENST00000476391 PLS3P13797 630 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 NT5C2P49902 561 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 PDAP1Q13442 181 aaKnown RBP14.53□□□□□ -0.08
HDAC1-206ENST00000476391 PRKD1Q15139 912 aaPredicted RBP14.53□□□□□ -0.08
HDAC1-206ENST00000476391 TGFBIQ15582 683 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 TRIP10Q15642 601 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 TRIP13Q15645 432 aaPredicted RBP14.53□□□□□ -0.08
HDAC1-206ENST00000476391 IZUMO3Q5VZ72 239 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 CHSY1Q86X52 802 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 SLC25A41Q8N5S1 370 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 AGPAT1Q99943 283 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 OSBPL6Q9BZF3 934 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 KCNK4Q9NYG8 393 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 RRN3Q9NYV6 651 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 RAB26Q9ULW5 256 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 TSC22D4Q9Y3Q8 395 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 UBR2Q8IWV8 1755 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 RGPD5Q99666 1765 aa14.53□□□□□ -0.08
HDAC1-206ENST00000476391 ATP5BP06576 529 aaKnown RBP14.52□□□□□ -0.08
HDAC1-206ENST00000476391 ZNF12P17014 697 aa14.52□□□□□ -0.08
HDAC1-206ENST00000476391 NAT1P18440 290 aa14.52□□□□□ -0.08
HDAC1-206ENST00000476391 NUP107P57740 925 aa14.52□□□□□ -0.08
HDAC1-206ENST00000476391 ECM1Q16610 540 aa14.52□□□□□ -0.08
HDAC1-206ENST00000476391 SLC35G1Q2M3R5 365 aa14.52□□□□□ -0.08
HDAC1-206ENST00000476391 GSTCDQ8NEC7 633 aa14.52□□□□□ -0.08
HDAC1-206ENST00000476391 HELBQ8NG08 1087 aaPredicted RBP14.52□□□□□ -0.08
HDAC1-206ENST00000476391 PHF12Q96QT6 1004 aa14.52□□□□□ -0.08
HDAC1-206ENST00000476391 SELENONQ9NZV5 590 aa14.52□□□□□ -0.08
HDAC1-206ENST00000476391 SOX13Q9UN79 622 aa14.52□□□□□ -0.08
HDAC1-206ENST00000476391 GPC6Q9Y625 555 aaPredicted RBP14.52□□□□□ -0.08
HDAC1-206ENST00000476391 SPATA31A1Q5TZJ5 1347 aa14.52□□□□□ -0.08
HDAC1-206ENST00000476391 DCCP43146 1447 aa14.52□□□□□ -0.09
HDAC1-206ENST00000476391 A0A088AWK7 358 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms