RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ODC1P11926 461 aa17.48■□□□□ 0.39
COL1A1-205ENST00000476387 NDUFA8P51970 172 aa17.48■□□□□ 0.39
COL1A1-205ENST00000476387 EPHA5P54756 1037 aa17.48■□□□□ 0.39
COL1A1-205ENST00000476387 TWF1Q12792 350 aa17.48■□□□□ 0.39
COL1A1-205ENST00000476387 SNW1Q13573 536 aaKnown RBP17.48■□□□□ 0.39
COL1A1-205ENST00000476387 MYBPC2Q14324 1141 aa17.48■□□□□ 0.39
COL1A1-205ENST00000476387 SLC44A4Q53GD3 710 aa17.48■□□□□ 0.39
COL1A1-205ENST00000476387 OVOS1Q6IE37 1185 aa17.48■□□□□ 0.39
COL1A1-205ENST00000476387 HS2ST1Q7LGA3 356 aa17.48■□□□□ 0.39
COL1A1-205ENST00000476387 ASCL5Q7RTU5 278 aa17.48■□□□□ 0.39
COL1A1-205ENST00000476387 NELFCDQ8IXH7 590 aa17.48■□□□□ 0.39
COL1A1-205ENST00000476387 EFCAB13Q8IY85 973 aa17.48■□□□□ 0.39
COL1A1-205ENST00000476387 ZNF507Q8TCN5 953 aa17.48■□□□□ 0.39
COL1A1-205ENST00000476387 NKD2Q969F2 451 aaPredicted RBP17.48■□□□□ 0.39
COL1A1-205ENST00000476387 OSBPL6Q9BZF3 934 aa17.48■□□□□ 0.39
COL1A1-205ENST00000476387 SLC39A2Q9NP94 309 aa17.48■□□□□ 0.39
COL1A1-205ENST00000476387 CEP72Q9P209 647 aa17.48■□□□□ 0.39
COL1A1-205ENST00000476387 TIMM13Q9Y5L4 95 aaPredicted RBP17.48■□□□□ 0.39
COL1A1-205ENST00000476387 GVINP1Q7Z2Y8 2422 aa17.48■□□□□ 0.39
COL1A1-205ENST00000476387 FAM237AA0A1B0GTK4 181 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 ANO9A1A5B4 782 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 PIRO00625 290 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 CCR2P41597 374 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 TFAMQ00059 246 aaKnown RBP17.47■□□□□ 0.39
COL1A1-205ENST00000476387 GPR17Q13304 367 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 PLD1Q13393 1074 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 ZSWIM2Q8NEG5 633 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 CACTINQ8WUQ7 758 aaKnown RBP17.47■□□□□ 0.39
COL1A1-205ENST00000476387 SCFD1Q8WVM8 642 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 CCDC47Q96A33 483 aaKnown RBP17.47■□□□□ 0.39
COL1A1-205ENST00000476387 TCEAL4Q96EI5 215 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 CCDC34Q96HJ3 373 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 SENP8Q96LD8 212 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 ZNF560Q96MR9 790 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 FOXQ1Q9C009 403 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 ZFP14Q9HCL3 533 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 ASAH2Q9NR71 780 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 HSPBP1Q9NZL4 362 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 YIPF1Q9Y548 306 aa17.47■□□□□ 0.39
COL1A1-205ENST00000476387 DMDP11532 3685 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 GOLGA6L4A6NEF3 574 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 ZNF233A6NK53 670 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 VNN2O95498 520 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 FCARP24071 287 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 HOXD13P35453 343 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 TAF6P49848 677 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 SNRPFP62306 86 aaKnown RBP17.46■□□□□ 0.39
COL1A1-205ENST00000476387 BMT2Q1RMZ1 405 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 FAM78AQ5JUQ0 283 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 TANGO2Q6ICL3 276 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 POTEHQ6S545 545 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 C1orf210Q8IVY1 113 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 DNASE1L2Q92874 299 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 ASB16Q96NS5 453 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 SEMA4AQ9H3S1 761 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 KIAA1586Q9HCI6 787 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 AGPAT3Q9NRZ7 376 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 HSFX1Q9UBD0 423 aa17.46■□□□□ 0.39
COL1A1-205ENST00000476387 F5P12259 2224 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 SPTLC1O15269 473 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 KLRC4O43908 158 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 CYP11A1P05108 521 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 OR4Q2P0C623 313 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 TMEM191BP0C7N4 346 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 GLULP15104 373 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 MAGEA9P43362 315 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 EPHB3P54753 998 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 PSMD2Q13200 908 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 SURF1Q15526 300 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 SV2CQ496J9 727 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 KMT5BQ4FZB7 885 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 HS6ST3Q8IZP7 471 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 SMARCD2Q92925 531 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 PGLYRP2Q96PD5 576 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 PLA2G2FQ9BZM2 168 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 GPR88Q9GZN0 384 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 TRPV4Q9HBA0 871 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 PDE11AQ9HCR9 933 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 CGNQ9P2M7 1197 aaKnown RBP17.45■□□□□ 0.38
COL1A1-205ENST00000476387 DSEQ9UL01 958 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 R3HCC1Q9Y3T6 440 aaKnown RBP17.45■□□□□ 0.38
COL1A1-205ENST00000476387 CACNA1IQ9P0X4 2223 aa17.45■□□□□ 0.38
COL1A1-205ENST00000476387 TGFB1I1O43294 461 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 MOSPD3O75425 235 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 RPN1P04843 607 aaKnown RBP17.44■□□□□ 0.38
COL1A1-205ENST00000476387 ITGB3P05106 788 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 MYL4P12829 197 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 PNPLA4P41247 253 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 ALDH1A3P47895 512 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 CYP2J2P51589 502 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 WNT7BP56706 349 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 DUSP4Q13115 394 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 KNOP1Q1ED39 458 aaKnown RBP17.44■□□□□ 0.38
COL1A1-205ENST00000476387 CENPPQ6IPU0 288 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 KRBA2Q6ZNG9 492 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 METTL23Q86XA0 190 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 CBWD2Q8IUF1 395 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 GOLGA5Q8TBA6 731 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 ANKRD36BP1Q96IX9 119 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 NELL2Q99435 816 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms