RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 MYL7Q01449 175 aa31.69■■■□□ 2.66
HOXB3-208ENST00000476342 ROR1Q01973 937 aa31.69■■■□□ 2.66
HOXB3-208ENST00000476342 KCNH2Q12809 1159 aa31.69■■■□□ 2.66
HOXB3-208ENST00000476342 VN1R2Q8NFZ6 395 aa31.69■■■□□ 2.66
HOXB3-208ENST00000476342 COQ4Q9Y3A0 265 aa31.69■■■□□ 2.66
HOXB3-208ENST00000476342 MTCL1Q9Y4B5 1905 aaKnown RBP31.69■■■□□ 2.66
HOXB3-208ENST00000476342 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP31.68■■■□□ 2.66
HOXB3-208ENST00000476342 PMM2O15305 246 aa31.68■■■□□ 2.66
HOXB3-208ENST00000476342 P4HA2O15460 535 aa31.68■■■□□ 2.66
HOXB3-208ENST00000476342 AFPP02771 609 aaKnown RBP31.68■■■□□ 2.66
HOXB3-208ENST00000476342 CPB1P15086 417 aa31.68■■■□□ 2.66
HOXB3-208ENST00000476342 NOP14P78316 857 aaKnown RBP31.68■■■□□ 2.66
HOXB3-208ENST00000476342 RBM10P98175 930 aaKnown RBP31.68■■■□□ 2.66
HOXB3-208ENST00000476342 LIMS2Q7Z4I7 341 aa31.68■■■□□ 2.66
HOXB3-208ENST00000476342 DZANK1Q9NVP4 752 aa31.68■■■□□ 2.66
HOXB3-208ENST00000476342 TBX10O75333 385 aa31.67■■■□□ 2.66
HOXB3-208ENST00000476342 FAM163BP0C2L3 166 aa31.67■■■□□ 2.66
HOXB3-208ENST00000476342 ARPP19P56211 112 aa31.67■■■□□ 2.66
HOXB3-208ENST00000476342 BPIFA3Q9BQP9 254 aa31.67■■■□□ 2.66
HOXB3-208ENST00000476342 PI4K2AQ9BTU6 479 aa31.67■■■□□ 2.66
HOXB3-208ENST00000476342 SAMSN1Q9NSI8 373 aaKnown RBP31.67■■■□□ 2.66
HOXB3-208ENST00000476342 BARX2Q9UMQ3 279 aaPredicted RBP31.67■■■□□ 2.66
HOXB3-208ENST00000476342 SPDYE4A6NLX3 237 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 TACC1O75410 805 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 HSP90AA4PQ58FG1 418 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 WDR44Q5JSH3 913 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 LILRA6Q6PI73 481 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 ZNF461Q8TAF7 563 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 HDAC7Q8WUI4 952 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 PLEKHA4Q9H4M7 779 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 MAN1C1Q9NR34 630 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 DDX43Q9NXZ2 648 aaKnown RBP31.66■■■□□ 2.66
HOXB3-208ENST00000476342 POLIQ9UNA4 740 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 WDR27A2RRH5 827 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 KCNJ18B7U540 433 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 KCNA5P22460 613 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 EEF1GP26641 437 aaKnown RBP31.66■■■□□ 2.66
HOXB3-208ENST00000476342 LTBRP36941 435 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 KCNJ12Q14500 433 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 TPGS2Q68CL5 300 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 SPOPLQ6IQ16 392 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 THEGQ9P2T0 379 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 FBXW11Q9UKB1 542 aa31.66■■■□□ 2.66
HOXB3-208ENST00000476342 XIRP2A4UGR9 3374 aa31.65■■■□□ 2.66
HOXB3-208ENST00000476342 GABRDO14764 452 aa31.65■■■□□ 2.66
HOXB3-208ENST00000476342 HOXB8P17481 243 aaPredicted RBP31.65■■■□□ 2.66
HOXB3-208ENST00000476342 WARSP23381 471 aaKnown RBP31.65■■■□□ 2.66
HOXB3-208ENST00000476342 PCSK1P29120 753 aa31.65■■■□□ 2.66
HOXB3-208ENST00000476342 TSPY1Q01534 308 aa31.65■■■□□ 2.66
HOXB3-208ENST00000476342 DLX2Q07687 328 aaPredicted RBP31.65■■■□□ 2.66
HOXB3-208ENST00000476342 MAN2A1Q16706 1144 aa31.65■■■□□ 2.66
HOXB3-208ENST00000476342 ANKRD54Q6NXT1 300 aa31.65■■■□□ 2.66
HOXB3-208ENST00000476342 KREMEN2Q8NCW0 462 aa31.65■■■□□ 2.66
HOXB3-208ENST00000476342 OR10T2Q8NGX3 314 aa31.65■■■□□ 2.66
HOXB3-208ENST00000476342 KBTBD7Q8WVZ9 684 aa31.65■■■□□ 2.66
HOXB3-208ENST00000476342 SEMA4DQ92854 862 aa31.65■■■□□ 2.66
HOXB3-208ENST00000476342 RTP3Q9BQQ7 232 aa31.65■■■□□ 2.66
HOXB3-208ENST00000476342 ACBD6Q9BR61 282 aa31.65■■■□□ 2.66
HOXB3-208ENST00000476342 CLEC1BQ9P126 229 aa31.65■■■□□ 2.66
HOXB3-208ENST00000476342 ABLIM3O94929 683 aa31.64■■■□□ 2.66
HOXB3-208ENST00000476342 ZNF165P49910 485 aa31.64■■■□□ 2.66
HOXB3-208ENST00000476342 LIN9Q5TKA1 542 aa31.64■■■□□ 2.66
HOXB3-208ENST00000476342 SCARA5Q6ZMJ2 495 aa31.64■■■□□ 2.66
HOXB3-208ENST00000476342 AOPEPQ8N6M6 819 aa31.64■■■□□ 2.66
HOXB3-208ENST00000476342 ELMO3Q96BJ8 720 aa31.64■■■□□ 2.66
HOXB3-208ENST00000476342 FAXDC2Q96IV6 333 aa31.64■■■□□ 2.66
HOXB3-208ENST00000476342 NIF3L1Q9GZT8 377 aa31.64■■■□□ 2.66
HOXB3-208ENST00000476342 SNX25Q9H3E2 840 aa31.64■■■□□ 2.66
HOXB3-208ENST00000476342 PRDM6Q9NQX0 595 aa31.64■■■□□ 2.66
HOXB3-208ENST00000476342 UTP3Q9NQZ2 479 aaKnown RBP eCLIP31.64■■■□□ 2.665e-7■■■■■ 160.7
HOXB3-208ENST00000476342 SPATA31D3P0C874 917 aa31.63■■■□□ 2.65
HOXB3-208ENST00000476342 PRKCSHP14314 528 aaPredicted RBP31.63■■■□□ 2.65
HOXB3-208ENST00000476342 GPR17Q13304 367 aa31.63■■■□□ 2.65
HOXB3-208ENST00000476342 TCP11X2Q5H9J9 407 aa31.63■■■□□ 2.65
HOXB3-208ENST00000476342 CDKAL1Q5VV42 579 aa31.63■■■□□ 2.65
HOXB3-208ENST00000476342 SPATA31D4Q6ZUB0 917 aa31.63■■■□□ 2.65
HOXB3-208ENST00000476342 OSTM1Q86WC4 334 aa31.63■■■□□ 2.65
HOXB3-208ENST00000476342 DCP1BQ8IZD4 617 aaKnown RBP31.63■■■□□ 2.65
HOXB3-208ENST00000476342 TUBGCP2Q9BSJ2 902 aa31.63■■■□□ 2.65
HOXB3-208ENST00000476342 ZCWPW1Q9H0M4 648 aa31.63■■■□□ 2.65
HOXB3-208ENST00000476342 SMYD3Q9H7B4 428 aa31.63■■■□□ 2.65
HOXB3-208ENST00000476342 SFXN1Q9H9B4 322 aa31.63■■■□□ 2.65
HOXB3-208ENST00000476342 APOBEC3GQ9HC16 384 aaKnown RBP31.63■■■□□ 2.65
HOXB3-208ENST00000476342 FANCLQ9NW38 375 aa31.63■■■□□ 2.65
HOXB3-208ENST00000476342 AFF4Q9UHB7 1163 aaKnown RBP31.63■■■□□ 2.65
HOXB3-208ENST00000476342 OR4Q2P0C623 313 aa31.62■■■□□ 2.65
HOXB3-208ENST00000476342 ATF2P15336 505 aa31.62■■■□□ 2.65
HOXB3-208ENST00000476342 ELF1P32519 619 aa31.62■■■□□ 2.65
HOXB3-208ENST00000476342 OR6B3Q8NGW1 331 aa31.62■■■□□ 2.65
HOXB3-208ENST00000476342 TMEM209Q96SK2 561 aa31.62■■■□□ 2.65
HOXB3-208ENST00000476342 MRPL45Q9BRJ2 306 aaKnown RBP31.62■■■□□ 2.65
HOXB3-208ENST00000476342 MAFFQ9ULX9 164 aa31.62■■■□□ 2.65
HOXB3-208ENST00000476342 SMTNL1A8MU46 457 aa31.61■■■□□ 2.65
HOXB3-208ENST00000476342 H3BQ06 376 aaPredicted RBP31.61■■■□□ 2.65
HOXB3-208ENST00000476342 LRRN2O75325 713 aa31.61■■■□□ 2.65
HOXB3-208ENST00000476342 CAVIN2O95810 425 aa31.61■■■□□ 2.65
HOXB3-208ENST00000476342 GNL1P36915 607 aaPredicted RBP31.61■■■□□ 2.65
HOXB3-208ENST00000476342 ASPAP45381 313 aa31.61■■■□□ 2.65
HOXB3-208ENST00000476342 SMARCB1Q12824 385 aa31.61■■■□□ 2.65
HOXB3-208ENST00000476342 CCDC149Q6ZUS6 474 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms