RNA–Protein interactions for RNA: ENST00000475651.5

RBM39-229, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-229	ENST00000475651	ESYT3	A0FGR9	886 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	ZNF839	A8K0R7	811 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	KCNJ18	B7U540	433 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	TMEM232	C9JQI7	657 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	FAM47E-STBD1	D6RA91	191 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	SMAD7	O15105	426 aa	Known RBP	4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	TBX1	O43435	398 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	PRDM1	O75626	825 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	CAMTA2	O94983	1202 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	ZSCAN20	P17040	1043 aa	Predicted RBP	4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	ACRV1	P26436	265 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	GNA11	P29992	359 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	GUCY1A2	P33402	732 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	CCT6A	P40227	531 aa	Known RBP	4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	MTIF2	P46199	727 aa	Known RBP	4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	GYG1	P46976	350 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	MEOX1	P50221	254 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	RRAD	P55042	308 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	RPS8	P62241	208 aa	Known RBP	4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	TFAP4	Q01664	338 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	RBL2	Q08999	1139 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	TUBA3C	Q13748	450 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	KCNJ12	Q14500	433 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	SF3B3	Q15393	1217 aa	Known RBP	4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	SPA17	Q15506	151 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	PFKFB3	Q16875	520 aa	Predicted RBP	4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	CCDC93	Q567U6	631 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	PHF19	Q5T6S3	580 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	CNNM4	Q6P4Q7	775 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	CTR9	Q6PD62	1173 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	TUBA3E	Q6PEY2	450 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	LEKR1	Q6ZMV7	388 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	HEATR3	Q7Z4Q2	680 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	ZNF804A	Q7Z570	1209 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	DGKH	Q86XP1	1220 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	GRAMD1C	Q8IYS0	662 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	BLID	Q8IZY5	108 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	OR8K1	Q8NGG5	319 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	MICAL1	Q8TDZ2	1067 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	DCAF4	Q8WV16	495 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	CLEC4D	Q8WXI8	215 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	DPF2	Q92785	391 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	EXTL1	Q92935	676 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	ZG16B	Q96DA0	208 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	KCNJ15	Q99712	375 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	TSG101	Q99816	390 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	TACO1	Q9BSH4	297 aa	Known RBP	4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	TSGA10	Q9BZW7	698 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	TSPYL1	Q9H0U9	437 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	TMX1	Q9H3N1	280 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	THAP9	Q9H5L6	903 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	C6orf50	Q9HD87	102 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	PARPBP	Q9NWS1	579 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	RBPJL	Q9UBG7	517 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	LUC7L2	Q9Y383	392 aa	Known RBP	4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	SLC30A1	Q9Y6M5	507 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	PKD1L3	Q7Z443	1732 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	LAMB4	A4D0S4	1761 aa		4.63	□□□□□ -1.67
RBM39-229	ENST00000475651	POLR3G	O15318	223 aa	Predicted RBP	4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	FOXN1	O15353	648 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	KRT86	O43790	486 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	MFAP3L	O75121	409 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	NTSR2	O95665	410 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	HMGCR	P04035	888 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	PARP1	P09874	1014 aa	Known RBP	4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	H2AFX	P16104	143 aa	Predicted RBP	4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	ZNF18	P17022	549 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	TRIM21	P19474	475 aa	Known RBP	4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	EEF1G	P26641	437 aa	Known RBP	4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	KRT9	P35527	623 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	EPS15	P42566	896 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	TNNT3	P45378	269 aa	Predicted RBP	4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	DNM2	P50570	870 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	TOB1	P50616	345 aa	Predicted RBP	4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	COPB1	P53618	953 aa	Known RBP	4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	NAPA	P54920	295 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	DYNLL1	P63167	89 aa	Known RBP	4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	ATP2C1	P98194	919 aa	Predicted RBP	4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	TBX2	Q13207	712 aa	Predicted RBP	4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	NONO	Q15233	471 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	SEC23A	Q15436	765 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	TERF2	Q15554	542 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	SF1	Q15637	639 aa	Known RBP	4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	SBK1	Q52WX2	424 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	TCP11X2	Q5H9J9	407 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	FAM47A	Q5JRC9	791 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	SLC35F1	Q5T1Q4	408 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	TOGARAM2	Q6ZUX3	1019 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	KCTD1	Q719H9	257 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	SRGAP1	Q7Z6B7	1085 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	TC2N	Q8N9U0	490 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	ZNF483	Q8TF39	744 aa	Predicted RBP	4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	RRP36	Q96EU6	259 aa	Known RBP	4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	EPSTI1	Q96J88	318 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	RPGRIP1	Q96KN7	1286 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	AK8	Q96MA6	479 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	ALS2CR12	Q96Q35	445 aa		4.62	□□□□□ -1.67
RBM39-229	ENST00000475651	NAP1L4	Q99733	375 aa	Known RBP	4.62	□□□□□ -1.67

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