RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 LRMPQ12912 555 aa16.2■□□□□ 0.18
MCF2L-224ENST00000475524 OVOS1Q6IE37 1185 aa16.2■□□□□ 0.18
MCF2L-224ENST00000475524 CACNA2D4Q7Z3S7 1137 aa16.2■□□□□ 0.18
MCF2L-224ENST00000475524 FBXO22Q8NEZ5 403 aa16.2■□□□□ 0.18
MCF2L-224ENST00000475524 ZNF397Q8NF99 534 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-224ENST00000475524 KBTBD7Q8WVZ9 684 aa16.2■□□□□ 0.18
MCF2L-224ENST00000475524 ANP32BQ92688 251 aaKnown RBP16.2■□□□□ 0.18
MCF2L-224ENST00000475524 C17orf80Q9BSJ5 609 aa16.2■□□□□ 0.18
MCF2L-224ENST00000475524 VN1R3Q9BXE9 311 aa16.2■□□□□ 0.18
MCF2L-224ENST00000475524 SMYD3Q9H7B4 428 aa16.2■□□□□ 0.18
MCF2L-224ENST00000475524 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.2■□□□□ 0.18
MCF2L-224ENST00000475524 CISHQ9NSE2 258 aa16.2■□□□□ 0.18
MCF2L-224ENST00000475524 IMPACTQ9P2X3 320 aa16.2■□□□□ 0.18
MCF2L-224ENST00000475524 CAPN11Q9UMQ6 739 aa16.2■□□□□ 0.18
MCF2L-224ENST00000475524 BACE2Q9Y5Z0 518 aa16.2■□□□□ 0.18
MCF2L-224ENST00000475524 IRAK3Q9Y616 596 aa16.2■□□□□ 0.18
MCF2L-224ENST00000475524 COL4A4P53420 1690 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-224ENST00000475524 OR6C75A6NL08 312 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 EPHB6O15197 1021 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 CILPO75339 1184 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 GYPCP04921 128 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 URODP06132 367 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 CTSAP10619 480 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 ACO1P21399 889 aaKnown RBP16.19■□□□□ 0.18
MCF2L-224ENST00000475524 TKTP29401 623 aaKnown RBP16.19■□□□□ 0.18
MCF2L-224ENST00000475524 TBX2Q13207 712 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-224ENST00000475524 ARID5BQ14865 1188 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 WSCD1Q658N2 575 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 ZNF280DQ6N043 979 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 RRAGAQ7L523 313 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 THEM5Q8N1Q8 247 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 SPPL3Q8TCT6 385 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 SYN2Q92777 582 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-224ENST00000475524 TNIP3Q96KP6 325 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 SPAG5Q96R06 1193 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 ARID3AQ99856 593 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 ACBD6Q9BR61 282 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 ZBP1Q9H171 429 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 SDCBP2Q9H190 292 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 SNX25Q9H3E2 840 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 KIAA1257Q9ULG3 409 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 STXBP5LQ9Y2K9 1186 aa16.19■□□□□ 0.18
MCF2L-224ENST00000475524 F8VZ95 297 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 I3L4J1 428 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 TBC1D4O60343 1298 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 C1RP00736 705 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 PAEPP09466 180 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 WEE2P0C1S8 567 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 CCDC172P0C7W6 258 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 GNL1P36915 607 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-224ENST00000475524 ZNF132P52740 706 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 BPIFB4P59827 614 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 ZBED6P86452 979 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 SMARCB1Q12824 385 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 RAPGEF1Q13905 1077 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 DRAP1Q14919 205 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-224ENST00000475524 VARS2Q5ST30 1063 aaKnown RBP16.18■□□□□ 0.18
MCF2L-224ENST00000475524 KIAA0319Q5VV43 1072 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 KIAA1841Q6NSI8 718 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 GJB7Q6PEY0 223 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 SCARA5Q6ZMJ2 495 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 PPFIBP1Q86W92 1011 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 FAM71AQ8IYT1 594 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 VPS52Q8N1B4 723 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 CRYBG2Q8N1P7 616 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 BAP1Q92560 729 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 KAT5Q92993 513 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 MRPL45Q9BRJ2 306 aaKnown RBP16.18■□□□□ 0.18
MCF2L-224ENST00000475524 NT5C1AQ9BXI3 368 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 NGRNQ9NPE2 291 aaKnown RBP16.18■□□□□ 0.18
MCF2L-224ENST00000475524 FNIP2Q9P278 1114 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 MTRRQ9UBK8 725 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 CDH9Q9ULB4 789 aa16.18■□□□□ 0.18
MCF2L-224ENST00000475524 LUC7L2Q9Y383 392 aaKnown RBP16.18■□□□□ 0.18
MCF2L-224ENST00000475524 GOLGA6L6A8MZA4 724 aa16.17■□□□□ 0.18
MCF2L-224ENST00000475524 STAT1P42224 750 aa16.17■□□□□ 0.18
MCF2L-224ENST00000475524 CDH8P55286 799 aa16.17■□□□□ 0.18
MCF2L-224ENST00000475524 APBA1Q02410 837 aa16.17■□□□□ 0.18
MCF2L-224ENST00000475524 GPM6BQ13491 265 aa16.17■□□□□ 0.18
MCF2L-224ENST00000475524 MAPRE1Q15691 268 aaKnown RBP16.17■□□□□ 0.18
MCF2L-224ENST00000475524 RTP2Q5QGT7 225 aa16.17■□□□□ 0.18
MCF2L-224ENST00000475524 TMC6Q7Z403 805 aa16.17■□□□□ 0.18
MCF2L-224ENST00000475524 CNGA4Q8IV77 575 aa16.17■□□□□ 0.18
MCF2L-224ENST00000475524 OR6B3Q8NGW1 331 aa16.17■□□□□ 0.18
MCF2L-224ENST00000475524 LNX1Q8TBB1 728 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-224ENST00000475524 GPR88Q9GZN0 384 aa16.17■□□□□ 0.18
MCF2L-224ENST00000475524 RXFP1Q9HBX9 757 aa16.17■□□□□ 0.18
MCF2L-224ENST00000475524 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.17■□□□□ 0.18
MCF2L-224ENST00000475524 TLR9Q9NR96 1032 aa16.17■□□□□ 0.18
MCF2L-224ENST00000475524 MRPL17Q9NRX2 175 aaKnown RBP16.17■□□□□ 0.18
MCF2L-224ENST00000475524 DDX43Q9NXZ2 648 aaKnown RBP16.17■□□□□ 0.18
MCF2L-224ENST00000475524 AJAP1Q9UKB5 411 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-224ENST00000475524 A8MXQ7 604 aa16.16■□□□□ 0.18
MCF2L-224ENST00000475524 FSCN2O14926 492 aa16.16■□□□□ 0.18
MCF2L-224ENST00000475524 LILRB3O75022 631 aa16.16■□□□□ 0.18
MCF2L-224ENST00000475524 HNRNPH3P31942 346 aaKnown RBP16.16■□□□□ 0.18
MCF2L-224ENST00000475524 SOX5P35711 763 aa16.16■□□□□ 0.18
MCF2L-224ENST00000475524 RAP1GAPP47736 663 aa16.16■□□□□ 0.18
MCF2L-224ENST00000475524 NDST1P52848 882 aa16.16■□□□□ 0.18
MCF2L-224ENST00000475524 SMC1AQ14683 1233 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms