RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 GUCY2FP51841 1108 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 TDGQ13569 410 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 ASTLQ6HA08 431 aaPredicted RBP12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 SUGP1Q8IWZ8 645 aaKnown RBP12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 TCEAL8Q8IYN2 117 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 GPD1LQ8N335 351 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 LEO1Q8WVC0 666 aaPredicted RBP12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 SAAL1Q96ER3 474 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 ASIC4Q96FT7 647 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 SCAND2PQ9GZW5 306 aaPredicted RBP12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 KCNH6Q9H252 994 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 KCNK12Q9HB15 430 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 CYP4F11Q9HBI6 524 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 CHCHD3Q9NX63 227 aaKnown RBP12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 DPP3Q9NY33 737 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 AFF4Q9UHB7 1163 aaKnown RBP12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 USP25Q9UHP3 1055 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 DSEQ9UL01 958 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 ZDHHC9Q9Y397 364 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 UBE4BO95155 1302 aa12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 SLFN14P0C7P3 912 aa12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 LAMP2P13473 410 aa12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 PNPLA4P41247 253 aa12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 TAF6P49848 677 aa12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 SNRPFP62306 86 aaKnown RBP12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 PDAP1Q13442 181 aaKnown RBP12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 OVOS1Q6IE37 1185 aa12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 EPM2AIP1Q7L775 607 aaPredicted RBP12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 CCDC91Q7Z6B0 441 aa12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 FBXL6Q8N531 539 aa12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 ACRBPQ8NEB7 543 aa12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 ZNF507Q8TCN5 953 aa12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 CACTINQ8WUQ7 758 aaKnown RBP12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 SENP8Q96LD8 212 aa12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 ZNF560Q96MR9 790 aa12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 MYADMQ96S97 322 aa12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 CBWD1Q9BRT8 395 aa12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 KIAA1586Q9HCI6 787 aa12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 CDH7Q9ULB5 785 aa12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 TIMM13Q9Y5L4 95 aaPredicted RBP12.41□□□□□ -0.42
HLA-DOB-208ENST00000475235 H0YHG0 523 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 PPEF2O14830 753 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 ATMINO43313 823 aaPredicted RBP12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 CBFA2T2O43439 604 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 CREB3O43889 395 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 MYL1P05976 194 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 AFMP43652 599 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 TFAMQ00059 246 aaKnown RBP12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 EHHADHQ08426 723 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 SURF1Q15526 300 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 SV2CQ496J9 727 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 PABPC1LQ4VXU2 614 aaKnown RBP12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 HS2ST1Q7LGA3 356 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 METTL23Q86XA0 190 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 EFCAB13Q8IY85 973 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 ELMOD1Q8N336 334 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 HPS3Q969F9 1004 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 AGAP3Q96P47 875 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 ARPC5LQ9BPX5 153 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 TACO1Q9BSH4 297 aaKnown RBP12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 BLZF1Q9H2G9 400 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 PCIF1Q9H4Z3 704 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 AVENQ9NQS1 362 aaPredicted RBP12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 RAPGEFL1Q9UHV5 662 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 DUSP12Q9UNI6 340 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 INSL5Q9Y5Q6 135 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 COMMD10Q9Y6G5 202 aa12.4□□□□□ -0.42
HLA-DOB-208ENST00000475235 ZNF233A6NK53 670 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 SPTLC1O15269 473 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 CYP11A1P05108 521 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 PFKFB1P16118 471 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 PTPN2P17706 415 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 GSCP56915 257 aaPredicted RBP12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 ADCY1Q08828 1119 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 GPR17Q13304 367 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 PLD1Q13393 1074 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 BIRC2Q13490 618 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 CUL4BQ13620 913 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 HS1BP3Q53T59 392 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 IQCEQ6IPM2 695 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 MTSS1LQ765P7 747 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 ZNF771Q7L3S4 317 aaPredicted RBP12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 TMEM130Q8N3G9 435 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 GLIS3Q8NEA6 775 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 NOC3LQ8WTT2 800 aaKnown RBP12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 HSPBP1Q9NZL4 362 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 DNMT3BQ9UBC3 853 aaKnown RBP12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 SERTAD1Q9UHV2 236 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 ITGA11Q9UKX5 1188 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 HPSEQ9Y251 543 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 PLXNA3P51805 1871 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 MYH11P35749 1972 aa12.39□□□□□ -0.43
HLA-DOB-208ENST00000475235 A0A1B0GVL5 298 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 GOLGA8IPA6NC78 632 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 GOLGA8JA6NMD2 632 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 KPNA7A9QM74 516 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 ANHXE9PGG2 379 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 CYB561D2O14569 222 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 ACTN4O43707 911 aaKnown RBP12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 SEC24AO95486 1093 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms