RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 FGFR3P22607 806 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 RFX1P22670 979 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 WARSP23381 471 aaKnown RBP10.71□□□□□ -0.69
COL8A1-206ENST00000474648 CASP14P31944 242 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 ERVK-21P61565 698 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 TNNC1P63316 161 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 PLCB3Q01970 1234 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 GOLGA8FQ08AF8 430 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 GOLGA8DPQ0D2H9 430 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 ARHGAP44Q17R89 818 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 FNDC1Q4ZHG4 1894 aaPredicted RBP10.71□□□□□ -0.69
COL8A1-206ENST00000474648 FAM171A1Q5VUB5 890 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 FUT10Q6P4F1 479 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 SCARA5Q6ZMJ2 495 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 ENOSF1Q7L5Y1 443 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 DDX53Q86TM3 631 aaKnown RBP10.71□□□□□ -0.69
COL8A1-206ENST00000474648 KLHL23Q8NBE8 558 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 IQCDQ96DY2 449 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 PDLIM2Q96JY6 352 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 FAM81BQ96LP2 452 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 TWNKQ96RR1 684 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 RTP3Q9BQQ7 232 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 CHST7Q9NS84 486 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 CISHQ9NSE2 258 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 PCDHB12Q9Y5F1 795 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 SF3B1O75533 1304 aaKnown RBP eCLIP10.7□□□□□ -0.7
COL8A1-206ENST00000474648 C5orf67F2Z3F1 127 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 SYN3O14994 580 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 HCRTO43612 131 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 TRAPPC3O43617 180 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 TBC1D4O60343 1298 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 CILPO75339 1184 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 FGF18O76093 207 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 OAZ2O95190 189 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 PNMA6AP0CW24 399 aaPredicted RBP10.7□□□□□ -0.7
COL8A1-206ENST00000474648 CD58P19256 250 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 LMO2P25791 158 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 TKTP29401 623 aaKnown RBP10.7□□□□□ -0.7
COL8A1-206ENST00000474648 GNL1P36915 607 aaPredicted RBP10.7□□□□□ -0.7
COL8A1-206ENST00000474648 ZNF132P52740 706 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 SMAD3P84022 425 aaKnown RBP10.7□□□□□ -0.7
COL8A1-206ENST00000474648 ZBED6P86452 979 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 INCA1Q0VD86 236 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 RAPGEF1Q13905 1077 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 ARID5BQ14865 1188 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 RAB30Q15771 203 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 KIAA0319Q5VV43 1072 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 E4F1Q66K89 784 aaPredicted RBP10.7□□□□□ -0.7
COL8A1-206ENST00000474648 SMYD5Q6GMV2 418 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 PDXDC1Q6P996 788 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 PPFIBP1Q86W92 1011 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 PLPP6Q8IY26 295 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 FAM71AQ8IYT1 594 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 TMEM86AQ8N2M4 240 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 SPC24Q8NBT2 197 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 APPL2Q8NEU8 664 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 SPPL3Q8TCT6 385 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 B3GALT6Q96L58 329 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 PLVAPQ9BX97 442 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 ELOVL4Q9GZR5 314 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 NKX2-4Q9H2Z4 354 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 FAM124BQ9H5Z6 455 aaPredicted RBP10.7□□□□□ -0.7
COL8A1-206ENST00000474648 HMGXB4Q9UGU5 601 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 MSRAQ9UJ68 235 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 MYO6Q9UM54 1294 aa10.7□□□□□ -0.7
COL8A1-206ENST00000474648 BARX2Q9UMQ3 279 aaPredicted RBP10.7□□□□□ -0.7
COL8A1-206ENST00000474648 PDCD11Q14690 1871 aaKnown RBP10.7□□□□□ -0.7
COL8A1-206ENST00000474648 SCN1AP35498 2009 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 LRRC53A6NM62 1247 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 F8VZ95 297 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 LILRB3O75022 631 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 CALCAP01258 141 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 SOD2P04179 222 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 RB1P06400 928 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 ODC1P11926 461 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 CTNNB1P35222 781 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 CLCN1P35523 988 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 KRT9P35527 623 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 SOX5P35711 763 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 PPM1AP35813 382 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 STAT1P42224 750 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 NDST1P52848 882 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 RAD23BP54727 409 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 ADKP55263 362 aaKnown RBP10.69□□□□□ -0.7
COL8A1-206ENST00000474648 ELAVL2Q12926 359 aaKnown RBP10.69□□□□□ -0.7
COL8A1-206ENST00000474648 TRIM14Q14142 442 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 RTP2Q5QGT7 225 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 VARS2Q5ST30 1063 aaKnown RBP10.69□□□□□ -0.7
COL8A1-206ENST00000474648 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.69□□□□□ -0.7
COL8A1-206ENST00000474648 CACNA2D4Q7Z3S7 1137 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 IRF2BP2Q7Z5L9 587 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 UNC93AQ86WB7 457 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 DRC7Q8IY82 874 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 ADGRF2Q8IZF7 708 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 CRYBG2Q8N1P7 616 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 TC2NQ8N9U0 490 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 OR6B3Q8NGW1 331 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 LNX1Q8TBB1 728 aaPredicted RBP10.69□□□□□ -0.7
COL8A1-206ENST00000474648 SPATA18Q8TC71 538 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 TMEM169Q96HH4 297 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms