RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ADRB1P08588 477 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 CYP3A5P20815 502 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 AARSP49588 968 aaKnown RBP eCLIP15.19■□□□□ 0.02
CCDC78-209ENST00000474647 MLLT6P55198 1093 aaPredicted RBP15.19■□□□□ 0.02
CCDC78-209ENST00000474647 CYP4F8P98187 520 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 ENOX2Q16206 610 aaKnown RBP15.19■□□□□ 0.02
CCDC78-209ENST00000474647 ARHGAP29Q52LW3 1261 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 WDR44Q5JSH3 913 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 DGKKQ5KSL6 1271 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 CENPPQ6IPU0 288 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 ARMCX5Q6P1M9 558 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 GAREM2Q75VX8 874 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 ITIH5Q86UX2 942 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 RALGPS2Q86X27 583 aaPredicted RBP15.19■□□□□ 0.02
CCDC78-209ENST00000474647 PSMG2Q969U7 264 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 ZSCAN31Q96LW9 406 aaPredicted RBP15.19■□□□□ 0.02
CCDC78-209ENST00000474647 LPIN3Q9BQK8 851 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 RPF1Q9H9Y2 349 aaKnown RBP15.19■□□□□ 0.02
CCDC78-209ENST00000474647 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.19■□□□□ 0.02
CCDC78-209ENST00000474647 SH2B1Q9NRF2 756 aaPredicted RBP15.19■□□□□ 0.02
CCDC78-209ENST00000474647 C2orf42Q9NWW7 574 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 LARSQ9P2J5 1176 aaKnown RBP15.19■□□□□ 0.02
CCDC78-209ENST00000474647 ASB3Q9Y575 518 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.19■□□□□ 0.02
CCDC78-209ENST00000474647 CNOT1A5YKK6 2376 aaKnown RBP15.19■□□□□ 0.02
CCDC78-209ENST00000474647 H0YCG3 227 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 GDF9O60383 454 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 PRAMEF12O95522 483 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 PLA2G4BP0C869 781 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 TYMPP19971 482 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 HOXC13P31276 330 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 CNR2P34972 360 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 SLC12A3P55017 1021 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 NCKAP1LP55160 1127 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 TNK2Q07912 1038 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 MYBPC2Q14324 1141 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 DHX8Q14562 1220 aaKnown RBP15.18■□□□□ 0.02
CCDC78-209ENST00000474647 VEPH1Q14D04 833 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 ZBTB6Q15916 424 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 CSRP2Q16527 193 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 MGAT5BQ3V5L5 792 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 C8orf34Q49A92 452 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 SLC39A12Q504Y0 691 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 DNAJB7Q7Z6W7 309 aaPredicted RBP15.18■□□□□ 0.02
CCDC78-209ENST00000474647 FAM160A2Q8N612 972 aaPredicted RBP15.18■□□□□ 0.02
CCDC78-209ENST00000474647 SENP8Q96LD8 212 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 LRRC3BQ96PB8 259 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 GCNAQ96QF7 691 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 MKNK1Q9BUB5 465 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 KCND2Q9NZV8 630 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 CFAP47Q6ZTR5 3102 aa15.18■□□□□ 0.02
CCDC78-209ENST00000474647 OGTO15294 1046 aa15.17■□□□□ 0.02
CCDC78-209ENST00000474647 PAPSS2O95340 614 aaPredicted RBP15.17■□□□□ 0.02
CCDC78-209ENST00000474647 FGF19O95750 216 aa15.17■□□□□ 0.02
CCDC78-209ENST00000474647 LILRA4P59901 499 aa15.17■□□□□ 0.02
CCDC78-209ENST00000474647 TAF12Q16514 161 aa15.17■□□□□ 0.02
CCDC78-209ENST00000474647 AASDHQ4L235 1098 aaPredicted RBP15.17■□□□□ 0.02
CCDC78-209ENST00000474647 HYIQ5T013 277 aa15.17■□□□□ 0.02
CCDC78-209ENST00000474647 JADE1Q6IE81 842 aa15.17■□□□□ 0.02
CCDC78-209ENST00000474647 BPIFB1Q8TDL5 484 aa15.17■□□□□ 0.02
CCDC78-209ENST00000474647 CHAMP1Q96JM3 812 aa15.17■□□□□ 0.02
CCDC78-209ENST00000474647 MSTO1Q9BUK6 570 aa15.17■□□□□ 0.02
CCDC78-209ENST00000474647 SMG9Q9H0W8 520 aaKnown RBP15.17■□□□□ 0.02
CCDC78-209ENST00000474647 USP24Q9UPU5 2620 aa15.17■□□□□ 0.02
CCDC78-209ENST00000474647 PTPRDP23468 1912 aa15.17■□□□□ 0.02
CCDC78-209ENST00000474647 CEP192Q8TEP8 1941 aa15.17■□□□□ 0.02
CCDC78-209ENST00000474647 NFICP08651 508 aa15.16■□□□□ 0.02
CCDC78-209ENST00000474647 PXNP49023 591 aaPredicted RBP15.16■□□□□ 0.02
CCDC78-209ENST00000474647 ATP2C1P98194 919 aaPredicted RBP15.16■□□□□ 0.02
CCDC78-209ENST00000474647 CCINQ13939 588 aa15.16■□□□□ 0.02
CCDC78-209ENST00000474647 TMEM132DQ14C87 1099 aa15.16■□□□□ 0.02
CCDC78-209ENST00000474647 CCDC6Q16204 474 aa15.16■□□□□ 0.02
CCDC78-209ENST00000474647 KYAT1Q16773 422 aa15.16■□□□□ 0.02
CCDC78-209ENST00000474647 ST3GAL2Q16842 350 aa15.16■□□□□ 0.02
CCDC78-209ENST00000474647 SPATA1Q5VX52 437 aa15.16■□□□□ 0.02
CCDC78-209ENST00000474647 MYCT1Q8N699 235 aa15.16■□□□□ 0.02
CCDC78-209ENST00000474647 OR10T2Q8NGX3 314 aa15.16■□□□□ 0.02
CCDC78-209ENST00000474647 GIPC2Q8TF65 315 aa15.16■□□□□ 0.02
CCDC78-209ENST00000474647 REEP2Q9BRK0 252 aa15.16■□□□□ 0.02
CCDC78-209ENST00000474647 ZHX3Q9H4I2 956 aa15.16■□□□□ 0.02
CCDC78-209ENST00000474647 OBP2AQ9NY56 170 aa15.16■□□□□ 0.02
CCDC78-209ENST00000474647 TBX20Q9UMR3 447 aa15.16■□□□□ 0.02
CCDC78-209ENST00000474647 FRYQ5TBA9 3013 aa15.16■□□□□ 0.02
CCDC78-209ENST00000474647 TULP1O00294 542 aaPredicted RBP15.15■□□□□ 0.02
CCDC78-209ENST00000474647 AXIN1O15169 862 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 FAM189A1O60320 539 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 FAM13AO94988 1023 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 KRT18P05783 430 aaKnown RBP15.15■□□□□ 0.02
CCDC78-209ENST00000474647 ATF6P18850 670 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 CDC25CP30307 473 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 MCM2P49736 904 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 PLCB2Q00722 1185 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 ITPRIPL2Q3MIP1 535 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 TMEM119Q4V9L6 283 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 RILPL1Q5EBL4 403 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 ARSHQ5FYA8 562 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 C9orf57Q5W0N0 161 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 IL31Q6EBC2 164 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 WDR5BQ86VZ2 330 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 GPBP1Q86WP2 473 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms