RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 WEE2P0C1S8 567 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 GOLGA6DP0CG33 693 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 ZNF865P0CJ78 1059 aaPredicted RBP10.41□□□□□ -0.74
USP39-214ENST00000474572 CD58P19256 250 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 PTPN7P35236 360 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 OSTNP61366 133 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 TMEM132AQ24JP5 1023 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 C2CD6Q53TS8 623 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 CST9Q5W186 159 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 SCARA5Q6ZMJ2 495 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 ADAT2Q7Z6V5 191 aaKnown RBP10.41□□□□□ -0.74
USP39-214ENST00000474572 RASAL3Q86YV0 1011 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 TTC39CQ8N584 583 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 SLC4A11Q8NBS3 891 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 FAM76AQ8TAV0 307 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 FNIP1Q8TF40 1166 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 KAT2BQ92831 832 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 DCLK3Q9C098 648 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 DPH5Q9H2P9 285 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 PLEKHA5Q9HAU0 1116 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 TMBIM4Q9HC24 238 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 GOLGA6AQ9NYA3 693 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 PRDM4Q9UKN5 801 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 STRIP2Q9ULQ0 834 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 PLAAQ9Y263 795 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 Q9Y3F1 56 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 NEU2Q9Y3R4 380 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 TRIP11Q15643 1979 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 PASKQ96RG2 1323 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 MANSC4A6NHS7 340 aaPredicted RBP10.4□□□□□ -0.74
USP39-214ENST00000474572 O00370 1275 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 IGF2BP3O00425 579 aaKnown RBP eCLIP10.4□□□□□ -0.74
USP39-214ENST00000474572 ERLIN2O94905 339 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 NUDT17P0C025 328 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 VDRP11473 427 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 AXLP30530 894 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 HOXC8P31273 242 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 RPL21P46778 160 aaKnown RBP10.4□□□□□ -0.74
USP39-214ENST00000474572 GABRB2P47870 512 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 RPL7AP62424 266 aaKnown RBP10.4□□□□□ -0.74
USP39-214ENST00000474572 LACTBP83111 547 aaPredicted RBP10.4□□□□□ -0.74
USP39-214ENST00000474572 OGDHQ02218 1023 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 PTPN11Q06124 597 aaPredicted RBP10.4□□□□□ -0.74
USP39-214ENST00000474572 PTK6Q13882 451 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 PIGHQ14442 188 aaPredicted RBP10.4□□□□□ -0.74
USP39-214ENST00000474572 TMEM132DQ14C87 1099 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 ZBTB6Q15916 424 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 CCNG2Q16589 344 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 PTPN20Q4JDL3 420 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 SGO2Q562F6 1265 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 OLFML2BQ68BL8 750 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 DENND1BQ6P3S1 775 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 DNAJC24Q6P3W2 148 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 RHBDF2Q6PJF5 856 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 C17orf99Q6UX52 265 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 NLRP7Q8WX94 980 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 ART4Q93070 314 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 ACAP3Q96P50 834 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 TWNKQ96RR1 684 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 ADPGKQ9BRR6 497 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 ELOVL4Q9GZR5 314 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 EPB41L4BQ9H329 900 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 SMYD3Q9H7B4 428 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 RRAGCQ9HB90 399 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 HOMER3Q9NSC5 361 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 WHRNQ9P202 907 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 WDR35Q9P2L0 1181 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.4□□□□□ -0.74
USP39-214ENST00000474572 CEP83Q9Y592 693 aa10.4□□□□□ -0.74
USP39-214ENST00000474572 DOCK3Q8IZD9 2030 aa10.4□□□□□ -0.75
USP39-214ENST00000474572 SIGLEC16A6NMB1 481 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 HMGB1P1B2RPK0 211 aaPredicted RBP10.39□□□□□ -0.75
USP39-214ENST00000474572 CSDE1O75534 798 aaKnown RBP10.39□□□□□ -0.75
USP39-214ENST00000474572 GJB6O95452 261 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 ECEL1O95672 775 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 ITGBL1O95965 494 aaPredicted RBP10.39□□□□□ -0.75
USP39-214ENST00000474572 KRT14P02533 472 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 KRT19P08727 400 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 SMIM10L2AP0DMW4 78 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 SMIM10L2BP0DMW5 78 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 P4HA1P13674 534 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 POLR2BP30876 1174 aaKnown RBP10.39□□□□□ -0.75
USP39-214ENST00000474572 HOXA11P31270 313 aaPredicted RBP10.39□□□□□ -0.75
USP39-214ENST00000474572 SSTR3P32745 418 aaPredicted RBP10.39□□□□□ -0.75
USP39-214ENST00000474572 ACTN2P35609 894 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 RAP1GAPP47736 663 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 LMAN1P49257 510 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 CDH8P55286 799 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 EIF3BP55884 814 aaKnown RBP10.39□□□□□ -0.75
USP39-214ENST00000474572 COPS2P61201 443 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 RBP5P82980 135 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 ZNF844Q08AG5 666 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 ZNF268Q14587 947 aaPredicted RBP10.39□□□□□ -0.75
USP39-214ENST00000474572 CNGA2Q16280 664 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 WDR72Q3MJ13 1102 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 ZNF394Q53GI3 561 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 AGBL2Q5U5Z8 902 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 SLC27A1Q6PCB7 646 aa10.39□□□□□ -0.75
USP39-214ENST00000474572 DRICH1Q6PGQ1 229 aaPredicted RBP10.39□□□□□ -0.75
USP39-214ENST00000474572 KDM7AQ6ZMT4 941 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms