RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 NBPF8Q3BBV2 869 aa4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 MTX3Q5HYI7 312 aa4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 TMEM240Q5SV17 173 aa4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 PNMA8AQ86V59 439 aaPredicted RBP4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 CFAP52Q8N1V2 620 aa4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 CAMKK1Q8N5S9 505 aa4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 SLC17A8Q8NDX2 589 aa4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 TMIEQ8NEW7 156 aa4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 SNX19Q92543 992 aa4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 ZBTB9Q96C00 473 aa4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 PGBD1Q96JS3 809 aa4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 CHPF2Q9P2E5 772 aa4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 NR2E3Q9Y5X4 410 aa4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 E2F8A0AVK6 867 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 KLHL33A6NCF5 533 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 TSPAN6O43657 245 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 SNUPNO95149 360 aaKnown RBP4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 C5AR1P21730 350 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 RECQLP46063 649 aaPredicted RBP4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 ANXA11P50995 505 aaKnown RBP4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 GRM1Q13255 1194 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 ACAP2Q15057 778 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 PPP2R5AQ15172 486 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 ZNF626Q68DY1 528 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 SLC30A10Q6XR72 485 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 FMNL3Q8IVF7 1028 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 CPA6Q8N4T0 437 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 B3GALNT2Q8NCR0 500 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 TSR2Q969E8 191 aaKnown RBP4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 TCF7L1Q9HCS4 588 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 IP6K2Q9UHH9 426 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 TCEAL9Q9UHQ7 104 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 TUBD1Q9UJT1 453 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 PADI4Q9UM07 663 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 MRFAP1Q9Y605 127 aa4.67□□□□□ -1.66
TMEM50B-208ENST00000474272 CCDC195A0A1B0GUA6 201 aa4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 WDR27A2RRH5 827 aa4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 PRR35P0CG20 571 aa4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 NR2F6P10588 404 aa4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 MTHFD1P11586 935 aaKnown RBP4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 CCND1P24385 295 aa4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 EIF2B5Q13144 721 aaKnown RBP4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 ATP2B3Q16720 1220 aa4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 FAM153CQ494X1 144 aa4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 PABPC1LQ4VXU2 614 aaKnown RBP4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 IFI44Q8TCB0 444 aa4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 JPH3Q8WXH2 748 aaPredicted RBP4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 SSH1Q8WYL5 1049 aa4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 CAMKK2Q96RR4 588 aa4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 TDP1Q9NUW8 608 aa4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 ZNF180Q9UJW8 692 aa4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 ADGRA2Q96PE1 1338 aa4.66□□□□□ -1.66
TMEM50B-208ENST00000474272 PRPF3O43395 683 aaKnown RBP4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 NDUFS2O75306 463 aa4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 CD1AP06126 327 aa4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 PF4V1P10720 104 aa4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 MPGP29372 298 aa4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 IL10RAQ13651 578 aa4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 KLF9Q13886 244 aaPredicted RBP4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 ETFDHQ16134 617 aa4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 EFCAB2Q5VUJ9 269 aa4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 TAPT1Q6NXT6 567 aa4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 IL17RDQ8NFM7 739 aa4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 SH2D3AQ9BRG2 576 aa4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 PACSIN1Q9BY11 444 aa4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 SMOC2Q9H3U7 446 aa4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 KLC4Q9NSK0 619 aa4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 JKAMPQ9P055 326 aa4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 DKK3Q9UBP4 350 aa4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 SERGEFQ9UGK8 458 aa4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.65□□□□□ -1.67
TMEM50B-208ENST00000474272 E9PLN8 166 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 F5H697 171 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 SLC43A1O75387 559 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 RFPL1O75677 317 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 TTLL1O95922 423 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 HNRNPCP07910 306 aaKnown RBP eCLIP4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 CTGFP29279 349 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 NPTX2P47972 431 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 SOX10P56693 466 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 LLGL1Q15334 1064 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 KIAA1614Q5VZ46 1190 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 C11orf87Q6NUJ2 197 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 TMPRSS9Q7Z410 1059 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 TPH2Q8IWU9 490 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 CHPFQ8IZ52 775 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 SEMA6DQ8NFY4 1073 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 RFKQ969G6 155 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 TRIB1Q96RU8 372 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 VKORC1Q9BQB6 163 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 MRPS18AQ9NVS2 196 aaKnown RBP4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 FLRT1Q9NZU1 646 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 SERPINB13Q9UIV8 391 aa4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 NOB1Q9ULX3 412 aaKnown RBP4.64□□□□□ -1.67
TMEM50B-208ENST00000474272 LINC01548A6NM66 108 aa4.63□□□□□ -1.67
TMEM50B-208ENST00000474272 IKBKBO14920 756 aa4.63□□□□□ -1.67
TMEM50B-208ENST00000474272 URI1O94763 535 aaPredicted RBP4.63□□□□□ -1.67
TMEM50B-208ENST00000474272 EBLN1P0CF75 366 aa4.63□□□□□ -1.67
TMEM50B-208ENST00000474272 NHLRC4P0CG21 123 aaPredicted RBP4.63□□□□□ -1.67
TMEM50B-208ENST00000474272 KELP23276 732 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms